Gene : Carub.0003s0547 C. rubella v1.1
Defline:  (1 of 8) K02935 - large subunit ribosomal protein L7/L12 (RP-L7, MRPL12, rplL) Genomic Order:  547
Name:  ? Carub.0003s0547 Secondary Identifier:  ? PAC:39241316
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Carub.0003s0547 0.5kb upstream 0.5kb upstream 1971 true scaffold_3: 1855853-1857823 Capsella rubella
Carub.0003s0547 0.5kb upstream 0.5kb upstream 500 false scaffold_3: 1857324-1857823 Capsella rubella
Carub.0003s0547 0.5kb downstream 0.5kb downstream 1971 true scaffold_3: 1855353-1857323 Capsella rubella
Carub.0003s0547 0.5kb downstream 0.5kb downstream 500 false scaffold_3: 1855353-1855852 Capsella rubella
Carub.0003s0547 1.0kb upstream 1.0kb upstream 2471 true scaffold_3: 1855853-1858323 Capsella rubella
Carub.0003s0547 1.0kb upstream 1.0kb upstream 1000 false scaffold_3: 1857324-1858323 Capsella rubella
Carub.0003s0547 1.0kb downstream 1.0kb downstream 2471 true scaffold_3: 1854853-1857323 Capsella rubella
Carub.0003s0547 1.0kb downstream 1.0kb downstream 1000 false scaffold_3: 1854853-1855852 Capsella rubella
Carub.0003s0547 2.0kb upstream 2.0kb upstream 3471 true scaffold_3: 1855853-1859323 Capsella rubella
Carub.0003s0547 2.0kb upstream 2.0kb upstream 2000 false scaffold_3: 1857324-1859323 Capsella rubella
Carub.0003s0547 2.0kb downstream 2.0kb downstream 3471 true scaffold_3: 1853853-1857323 Capsella rubella
Carub.0003s0547 2.0kb downstream 2.0kb downstream 2000 false scaffold_3: 1853853-1855852 Capsella rubella
Carub.0003s0547 5.0kb upstream 5.0kb upstream 6471 true scaffold_3: 1855853-1862323 Capsella rubella
Carub.0003s0547 5.0kb upstream 5.0kb upstream 5000 false scaffold_3: 1857324-1862323 Capsella rubella
Carub.0003s0547 5.0kb downstream 5.0kb downstream 6471 true scaffold_3: 1850853-1857323 Capsella rubella
Carub.0003s0547 5.0kb downstream 5.0kb downstream 5000 false scaffold_3: 1850853-1855852 Capsella rubella
Carub.0003s0547 10.0kb upstream 10.0kb upstream 11471 true scaffold_3: 1855853-1867323 Capsella rubella
Carub.0003s0547 10.0kb upstream 10.0kb upstream 10000 false scaffold_3: 1857324-1867323 Capsella rubella
Carub.0003s0547 10.0kb downstream 10.0kb downstream 11471 true scaffold_3: 1845853-1857323 Capsella rubella
Carub.0003s0547 10.0kb downstream 10.0kb downstream 10000 false scaffold_3: 1845853-1855852 Capsella rubella

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122368304 5261 Brassicaceae View MSA
123833397 5264 Brassicales-Malvales View MSA
124344859 5266 SBM View MSA
124244566 5268 Malvidae View MSA
124065088 5270 Rosid View MSA
123737507 5271 Pentapetalae View MSA
122792305 5272 Eudicot View MSA
122044886 5273 Angiosperm View MSA
121348936 5274 Embryophyte View MSA
123427211 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain