Gene : Carub.0003s0563 C. rubella v1.1
Defline:  (1 of 18) K10523 - speckle-type POZ protein (SPOP) Genomic Order:  563
Name:  ? Carub.0003s0563 Secondary Identifier:  ? PAC:39239398
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Carub.0003s0563 0.5kb upstream 0.5kb upstream 3066 true scaffold_3: 1910613-1913678 Capsella rubella
Carub.0003s0563 0.5kb upstream 0.5kb upstream 500 false scaffold_3: 1913179-1913678 Capsella rubella
Carub.0003s0563 0.5kb downstream 0.5kb downstream 3066 true scaffold_3: 1910113-1913178 Capsella rubella
Carub.0003s0563 0.5kb downstream 0.5kb downstream 500 false scaffold_3: 1910113-1910612 Capsella rubella
Carub.0003s0563 1.0kb upstream 1.0kb upstream 3566 true scaffold_3: 1910613-1914178 Capsella rubella
Carub.0003s0563 1.0kb upstream 1.0kb upstream 1000 false scaffold_3: 1913179-1914178 Capsella rubella
Carub.0003s0563 1.0kb downstream 1.0kb downstream 3566 true scaffold_3: 1909613-1913178 Capsella rubella
Carub.0003s0563 1.0kb downstream 1.0kb downstream 1000 false scaffold_3: 1909613-1910612 Capsella rubella
Carub.0003s0563 2.0kb upstream 2.0kb upstream 4566 true scaffold_3: 1910613-1915178 Capsella rubella
Carub.0003s0563 2.0kb upstream 2.0kb upstream 2000 false scaffold_3: 1913179-1915178 Capsella rubella
Carub.0003s0563 2.0kb downstream 2.0kb downstream 4566 true scaffold_3: 1908613-1913178 Capsella rubella
Carub.0003s0563 2.0kb downstream 2.0kb downstream 2000 false scaffold_3: 1908613-1910612 Capsella rubella
Carub.0003s0563 5.0kb upstream 5.0kb upstream 7566 true scaffold_3: 1910613-1918178 Capsella rubella
Carub.0003s0563 5.0kb upstream 5.0kb upstream 5000 false scaffold_3: 1913179-1918178 Capsella rubella
Carub.0003s0563 5.0kb downstream 5.0kb downstream 7566 true scaffold_3: 1905613-1913178 Capsella rubella
Carub.0003s0563 5.0kb downstream 5.0kb downstream 5000 false scaffold_3: 1905613-1910612 Capsella rubella
Carub.0003s0563 10.0kb upstream 10.0kb upstream 12566 true scaffold_3: 1910613-1923178 Capsella rubella
Carub.0003s0563 10.0kb upstream 10.0kb upstream 10000 false scaffold_3: 1913179-1923178 Capsella rubella
Carub.0003s0563 10.0kb downstream 10.0kb downstream 12566 true scaffold_3: 1900613-1913178 Capsella rubella
Carub.0003s0563 10.0kb downstream 10.0kb downstream 10000 false scaffold_3: 1900613-1910612 Capsella rubella

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122040960 5273 Angiosperm View MSA
122378828 5261 Brassicaceae View MSA
123839948 5264 Brassicales-Malvales View MSA
124347827 5266 SBM View MSA
124244421 5268 Malvidae View MSA
124064148 5270 Rosid View MSA
123743633 5271 Pentapetalae View MSA
122791318 5272 Eudicot View MSA
121348457 5274 Embryophyte View MSA
123428082 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain