Gene : Carub.0003s0638 C. rubella v1.1
Defline:  (1 of 1) 2.3.1.168 - Dihydrolipoyllysine-residue (2-methylpropanoyl)transferase / Dihydrolipoyl transacylase Genomic Order:  638
Name:  ? Carub.0003s0638 Secondary Identifier:  ? PAC:39241732
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Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Crubella PWY-5046 Capsella rubella pathologic  
Crubella VALDEG-PWY Capsella rubella pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Carub.0003s0638 0.5kb upstream 0.5kb upstream 3055 true scaffold_3: 2192115-2195169 Capsella rubella
Carub.0003s0638 0.5kb upstream 0.5kb upstream 500 false scaffold_3: 2194670-2195169 Capsella rubella
Carub.0003s0638 0.5kb downstream 0.5kb downstream 3055 true scaffold_3: 2191615-2194669 Capsella rubella
Carub.0003s0638 0.5kb downstream 0.5kb downstream 500 false scaffold_3: 2191615-2192114 Capsella rubella
Carub.0003s0638 1.0kb upstream 1.0kb upstream 3555 true scaffold_3: 2192115-2195669 Capsella rubella
Carub.0003s0638 1.0kb upstream 1.0kb upstream 1000 false scaffold_3: 2194670-2195669 Capsella rubella
Carub.0003s0638 1.0kb downstream 1.0kb downstream 3555 true scaffold_3: 2191115-2194669 Capsella rubella
Carub.0003s0638 1.0kb downstream 1.0kb downstream 1000 false scaffold_3: 2191115-2192114 Capsella rubella
Carub.0003s0638 2.0kb upstream 2.0kb upstream 4555 true scaffold_3: 2192115-2196669 Capsella rubella
Carub.0003s0638 2.0kb upstream 2.0kb upstream 2000 false scaffold_3: 2194670-2196669 Capsella rubella
Carub.0003s0638 2.0kb downstream 2.0kb downstream 4555 true scaffold_3: 2190115-2194669 Capsella rubella
Carub.0003s0638 2.0kb downstream 2.0kb downstream 2000 false scaffold_3: 2190115-2192114 Capsella rubella
Carub.0003s0638 5.0kb upstream 5.0kb upstream 7555 true scaffold_3: 2192115-2199669 Capsella rubella
Carub.0003s0638 5.0kb upstream 5.0kb upstream 5000 false scaffold_3: 2194670-2199669 Capsella rubella
Carub.0003s0638 5.0kb downstream 5.0kb downstream 7555 true scaffold_3: 2187115-2194669 Capsella rubella
Carub.0003s0638 5.0kb downstream 5.0kb downstream 5000 false scaffold_3: 2187115-2192114 Capsella rubella
Carub.0003s0638 10.0kb upstream 10.0kb upstream 12555 true scaffold_3: 2192115-2204669 Capsella rubella
Carub.0003s0638 10.0kb upstream 10.0kb upstream 10000 false scaffold_3: 2194670-2204669 Capsella rubella
Carub.0003s0638 10.0kb downstream 10.0kb downstream 12555 true scaffold_3: 2182115-2194669 Capsella rubella
Carub.0003s0638 10.0kb downstream 10.0kb downstream 10000 false scaffold_3: 2182115-2192114 Capsella rubella

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122374576 5261 Brassicaceae View MSA
123833558 5264 Brassicales-Malvales View MSA
124336489 5266 SBM View MSA
124249806 5268 Malvidae View MSA
124066598 5270 Rosid View MSA
123740917 5271 Pentapetalae View MSA
122788338 5272 Eudicot View MSA
122046167 5273 Angiosperm View MSA
121344663 5274 Embryophyte View MSA
123425518 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain