Gene : Carub.0003s0644 C. rubella v1.1
Defline:  (1 of 29) PF01535//PF12854//PF13041 - PPR repeat (PPR) // PPR repeat (PPR_1) // PPR repeat family (PPR_2) Genomic Order:  644
Name:  ? Carub.0003s0644 Secondary Identifier:  ? PAC:39241524
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Carub.0003s0644 0.5kb upstream 0.5kb upstream 2747 true scaffold_3: 2217492-2220238 Capsella rubella
Carub.0003s0644 0.5kb upstream 0.5kb upstream 500 false scaffold_3: 2217492-2217991 Capsella rubella
Carub.0003s0644 0.5kb downstream 0.5kb downstream 2747 true scaffold_3: 2217992-2220738 Capsella rubella
Carub.0003s0644 0.5kb downstream 0.5kb downstream 500 false scaffold_3: 2220239-2220738 Capsella rubella
Carub.0003s0644 1.0kb upstream 1.0kb upstream 3247 true scaffold_3: 2216992-2220238 Capsella rubella
Carub.0003s0644 1.0kb upstream 1.0kb upstream 1000 false scaffold_3: 2216992-2217991 Capsella rubella
Carub.0003s0644 1.0kb downstream 1.0kb downstream 3247 true scaffold_3: 2217992-2221238 Capsella rubella
Carub.0003s0644 1.0kb downstream 1.0kb downstream 1000 false scaffold_3: 2220239-2221238 Capsella rubella
Carub.0003s0644 2.0kb upstream 2.0kb upstream 4247 true scaffold_3: 2215992-2220238 Capsella rubella
Carub.0003s0644 2.0kb upstream 2.0kb upstream 2000 false scaffold_3: 2215992-2217991 Capsella rubella
Carub.0003s0644 2.0kb downstream 2.0kb downstream 4247 true scaffold_3: 2217992-2222238 Capsella rubella
Carub.0003s0644 2.0kb downstream 2.0kb downstream 2000 false scaffold_3: 2220239-2222238 Capsella rubella
Carub.0003s0644 5.0kb upstream 5.0kb upstream 7247 true scaffold_3: 2212992-2220238 Capsella rubella
Carub.0003s0644 5.0kb upstream 5.0kb upstream 5000 false scaffold_3: 2212992-2217991 Capsella rubella
Carub.0003s0644 5.0kb downstream 5.0kb downstream 7247 true scaffold_3: 2217992-2225238 Capsella rubella
Carub.0003s0644 5.0kb downstream 5.0kb downstream 5000 false scaffold_3: 2220239-2225238 Capsella rubella
Carub.0003s0644 10.0kb upstream 10.0kb upstream 12247 true scaffold_3: 2207992-2220238 Capsella rubella
Carub.0003s0644 10.0kb upstream 10.0kb upstream 10000 false scaffold_3: 2207992-2217991 Capsella rubella
Carub.0003s0644 10.0kb downstream 10.0kb downstream 12247 true scaffold_3: 2217992-2230238 Capsella rubella
Carub.0003s0644 10.0kb downstream 10.0kb downstream 10000 false scaffold_3: 2220239-2230238 Capsella rubella

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122361496 5261 Brassicaceae View MSA
123830723 5264 Brassicales-Malvales View MSA
124341059 5266 SBM View MSA
124240602 5268 Malvidae View MSA
124068825 5270 Rosid View MSA
123736468 5271 Pentapetalae View MSA
122787025 5272 Eudicot View MSA
122042185 5273 Angiosperm View MSA
123429046 5275 Viridiplantae View MSA
121351195 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain