Gene : Carub.0003s0655 C. rubella v1.1

Defline:  (1 of 1) PTHR13516//PTHR13516:SF3 - RIBONUCLEASE P SUBUNIT P25 // ALBA DNA/RNA-BINDING PROTEIN Genomic Order:  655
Name:  ? Carub.0003s0655 Secondary Identifier:  ? PAC:39241004

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Carub.0003s0655 0.5kb upstream 0.5kb upstream 3437 true scaffold_3: 2255625-2259061 Capsella rubella
Carub.0003s0655 0.5kb upstream 0.5kb upstream 500 false scaffold_3: 2258562-2259061 Capsella rubella
Carub.0003s0655 0.5kb downstream 0.5kb downstream 3437 true scaffold_3: 2255125-2258561 Capsella rubella
Carub.0003s0655 0.5kb downstream 0.5kb downstream 500 false scaffold_3: 2255125-2255624 Capsella rubella
Carub.0003s0655 1.0kb upstream 1.0kb upstream 3937 true scaffold_3: 2255625-2259561 Capsella rubella
Carub.0003s0655 1.0kb upstream 1.0kb upstream 1000 false scaffold_3: 2258562-2259561 Capsella rubella
Carub.0003s0655 1.0kb downstream 1.0kb downstream 3937 true scaffold_3: 2254625-2258561 Capsella rubella
Carub.0003s0655 1.0kb downstream 1.0kb downstream 1000 false scaffold_3: 2254625-2255624 Capsella rubella
Carub.0003s0655 2.0kb upstream 2.0kb upstream 4937 true scaffold_3: 2255625-2260561 Capsella rubella
Carub.0003s0655 2.0kb upstream 2.0kb upstream 2000 false scaffold_3: 2258562-2260561 Capsella rubella
Carub.0003s0655 2.0kb downstream 2.0kb downstream 4937 true scaffold_3: 2253625-2258561 Capsella rubella
Carub.0003s0655 2.0kb downstream 2.0kb downstream 2000 false scaffold_3: 2253625-2255624 Capsella rubella
Carub.0003s0655 5.0kb upstream 5.0kb upstream 7937 true scaffold_3: 2255625-2263561 Capsella rubella
Carub.0003s0655 5.0kb upstream 5.0kb upstream 5000 false scaffold_3: 2258562-2263561 Capsella rubella
Carub.0003s0655 5.0kb downstream 5.0kb downstream 7937 true scaffold_3: 2250625-2258561 Capsella rubella
Carub.0003s0655 5.0kb downstream 5.0kb downstream 5000 false scaffold_3: 2250625-2255624 Capsella rubella
Carub.0003s0655 10.0kb upstream 10.0kb upstream 12937 true scaffold_3: 2255625-2268561 Capsella rubella
Carub.0003s0655 10.0kb upstream 10.0kb upstream 10000 false scaffold_3: 2258562-2268561 Capsella rubella
Carub.0003s0655 10.0kb downstream 10.0kb downstream 12937 true scaffold_3: 2245625-2258561 Capsella rubella
Carub.0003s0655 10.0kb downstream 10.0kb downstream 10000 false scaffold_3: 2245625-2255624 Capsella rubella

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122372684 5261 Brassicaceae View MSA
123800409 5264 Brassicales-Malvales View MSA
124297824 5266 SBM View MSA
124246988 5268 Malvidae View MSA
124070667 5270 Rosid View MSA
123752020 5271 Pentapetalae View MSA
122793375 5272 Eudicot View MSA
122050157 5273 Angiosperm View MSA
121346602 5274 Embryophyte View MSA
123428727 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain