Gene : Araha.3147s0009 A. halleri v1.1

Defline:  (1 of 2) PTHR23041:SF64 - E3 UBIQUITIN-PROTEIN LIGASE BAH1 Genomic Order:  9
Name:  ? Araha.3147s0009 Secondary Identifier:  ? PAC:28862894

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Araha.3147s0009 0.5kb upstream 0.5kb upstream 2854 true Scaffold3147: 21983-24836 Arabidopsis halleri
Araha.3147s0009 0.5kb upstream 0.5kb upstream 500 false Scaffold3147: 21983-22482 Arabidopsis halleri
Araha.3147s0009 0.5kb downstream 0.5kb downstream 2854 true Scaffold3147: 22483-25336 Arabidopsis halleri
Araha.3147s0009 0.5kb downstream 0.5kb downstream 500 false Scaffold3147: 24837-25336 Arabidopsis halleri
Araha.3147s0009 1.0kb upstream 1.0kb upstream 3354 true Scaffold3147: 21483-24836 Arabidopsis halleri
Araha.3147s0009 1.0kb upstream 1.0kb upstream 1000 false Scaffold3147: 21483-22482 Arabidopsis halleri
Araha.3147s0009 1.0kb downstream 1.0kb downstream 3354 true Scaffold3147: 22483-25836 Arabidopsis halleri
Araha.3147s0009 1.0kb downstream 1.0kb downstream 1000 false Scaffold3147: 24837-25836 Arabidopsis halleri
Araha.3147s0009 2.0kb upstream 2.0kb upstream 4354 true Scaffold3147: 20483-24836 Arabidopsis halleri
Araha.3147s0009 2.0kb upstream 2.0kb upstream 2000 false Scaffold3147: 20483-22482 Arabidopsis halleri
Araha.3147s0009 2.0kb downstream 2.0kb downstream 4354 true Scaffold3147: 22483-26836 Arabidopsis halleri
Araha.3147s0009 2.0kb downstream 2.0kb downstream 2000 false Scaffold3147: 24837-26836 Arabidopsis halleri
Araha.3147s0009 5.0kb upstream 5.0kb upstream 7354 true Scaffold3147: 17483-24836 Arabidopsis halleri
Araha.3147s0009 5.0kb upstream 5.0kb upstream 5000 false Scaffold3147: 17483-22482 Arabidopsis halleri
Araha.3147s0009 5.0kb downstream 5.0kb downstream 7354 true Scaffold3147: 22483-29836 Arabidopsis halleri
Araha.3147s0009 5.0kb downstream 5.0kb downstream 5000 false Scaffold3147: 24837-29836 Arabidopsis halleri
Araha.3147s0009 10.0kb upstream 10.0kb upstream 12354 true Scaffold3147: 12483-24836 Arabidopsis halleri
Araha.3147s0009 10.0kb upstream 10.0kb upstream 10000 false Scaffold3147: 12483-22482 Arabidopsis halleri
Araha.3147s0009 10.0kb downstream 10.0kb downstream 12354 true Scaffold3147: 22483-34836 Arabidopsis halleri
Araha.3147s0009 10.0kb downstream 10.0kb downstream 10000 false Scaffold3147: 24837-34836 Arabidopsis halleri

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122377622 5261 Brassicaceae View MSA
123828429 5264 Brassicales-Malvales View MSA
124341191 5266 SBM View MSA
124250498 5268 Malvidae View MSA
124062442 5270 Rosid View MSA
123751334 5271 Pentapetalae View MSA
122791887 5272 Eudicot View MSA
122042186 5273 Angiosperm View MSA
121350146 5274 Embryophyte View MSA
123425854 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain