Gene : Araha.3287s0004 A. halleri v1.1

Defline:  (1 of 1) PTHR31614:SF6 - POLLEN OLE E 1 ALLERGEN AND EXTENSIN FAMILY PROTEIN Genomic Order:  4
Name:  ? Araha.3287s0004 Secondary Identifier:  ? PAC:28853198

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Araha.3287s0004 0.5kb upstream 0.5kb upstream 1822 true Scaffold3287: 14917-16738 Arabidopsis halleri
Araha.3287s0004 0.5kb upstream 0.5kb upstream 500 false Scaffold3287: 14917-15416 Arabidopsis halleri
Araha.3287s0004 0.5kb downstream 0.5kb downstream 1822 true Scaffold3287: 15417-17238 Arabidopsis halleri
Araha.3287s0004 0.5kb downstream 0.5kb downstream 500 false Scaffold3287: 16739-17238 Arabidopsis halleri
Araha.3287s0004 1.0kb upstream 1.0kb upstream 2322 true Scaffold3287: 14417-16738 Arabidopsis halleri
Araha.3287s0004 1.0kb upstream 1.0kb upstream 1000 false Scaffold3287: 14417-15416 Arabidopsis halleri
Araha.3287s0004 1.0kb downstream 1.0kb downstream 2322 true Scaffold3287: 15417-17738 Arabidopsis halleri
Araha.3287s0004 1.0kb downstream 1.0kb downstream 1000 false Scaffold3287: 16739-17738 Arabidopsis halleri
Araha.3287s0004 2.0kb upstream 2.0kb upstream 3322 true Scaffold3287: 13417-16738 Arabidopsis halleri
Araha.3287s0004 2.0kb upstream 2.0kb upstream 2000 false Scaffold3287: 13417-15416 Arabidopsis halleri
Araha.3287s0004 2.0kb downstream 2.0kb downstream 3322 true Scaffold3287: 15417-18738 Arabidopsis halleri
Araha.3287s0004 2.0kb downstream 2.0kb downstream 2000 false Scaffold3287: 16739-18738 Arabidopsis halleri
Araha.3287s0004 5.0kb upstream 5.0kb upstream 6322 true Scaffold3287: 10417-16738 Arabidopsis halleri
Araha.3287s0004 5.0kb upstream 5.0kb upstream 5000 false Scaffold3287: 10417-15416 Arabidopsis halleri
Araha.3287s0004 5.0kb downstream 5.0kb downstream 6322 true Scaffold3287: 15417-21738 Arabidopsis halleri
Araha.3287s0004 5.0kb downstream 5.0kb downstream 5000 false Scaffold3287: 16739-21738 Arabidopsis halleri
Araha.3287s0004 10.0kb upstream 10.0kb upstream 11322 true Scaffold3287: 5417-16738 Arabidopsis halleri
Araha.3287s0004 10.0kb upstream 10.0kb upstream 10000 false Scaffold3287: 5417-15416 Arabidopsis halleri
Araha.3287s0004 10.0kb downstream 10.0kb downstream 11322 true Scaffold3287: 15417-26738 Arabidopsis halleri
Araha.3287s0004 10.0kb downstream 10.0kb downstream 10000 false Scaffold3287: 16739-26738 Arabidopsis halleri

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122362103 5261 Brassicaceae View MSA
123798307 5264 Brassicales-Malvales View MSA
124348200 5266 SBM View MSA
124244752 5268 Malvidae View MSA
124071328 5270 Rosid View MSA
123753295 5271 Pentapetalae View MSA
122796596 5272 Eudicot View MSA
122051631 5273 Angiosperm View MSA
121349317 5274 Embryophyte View MSA
123381274 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain