Gene : Araha.2716s0004 A. halleri v1.1
Defline:  (1 of 3) PF00564//PF03108//PF04434//PF10551 - PB1 domain (PB1) // MuDR family transposase (DBD_Tnp_Mut) // SWIM zinc finger (SWIM) // MULE transposase domain (MULE) Genomic Order:  4
Name:  ? Araha.2716s0004 Secondary Identifier:  ? PAC:28838492
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Araha.2716s0004 0.5kb upstream 0.5kb upstream 3945 true Scaffold2716: 9197-13141 Arabidopsis halleri
Araha.2716s0004 0.5kb upstream 0.5kb upstream 500 false Scaffold2716: 9197-9696 Arabidopsis halleri
Araha.2716s0004 0.5kb downstream 0.5kb downstream 3945 true Scaffold2716: 9697-13641 Arabidopsis halleri
Araha.2716s0004 0.5kb downstream 0.5kb downstream 500 false Scaffold2716: 13142-13641 Arabidopsis halleri
Araha.2716s0004 1.0kb upstream 1.0kb upstream 4445 true Scaffold2716: 8697-13141 Arabidopsis halleri
Araha.2716s0004 1.0kb upstream 1.0kb upstream 1000 false Scaffold2716: 8697-9696 Arabidopsis halleri
Araha.2716s0004 1.0kb downstream 1.0kb downstream 4445 true Scaffold2716: 9697-14141 Arabidopsis halleri
Araha.2716s0004 1.0kb downstream 1.0kb downstream 1000 false Scaffold2716: 13142-14141 Arabidopsis halleri
Araha.2716s0004 2.0kb upstream 2.0kb upstream 5445 true Scaffold2716: 7697-13141 Arabidopsis halleri
Araha.2716s0004 2.0kb upstream 2.0kb upstream 2000 false Scaffold2716: 7697-9696 Arabidopsis halleri
Araha.2716s0004 2.0kb downstream 2.0kb downstream 5445 true Scaffold2716: 9697-15141 Arabidopsis halleri
Araha.2716s0004 2.0kb downstream 2.0kb downstream 2000 false Scaffold2716: 13142-15141 Arabidopsis halleri
Araha.2716s0004 5.0kb upstream 5.0kb upstream 8445 true Scaffold2716: 4697-13141 Arabidopsis halleri
Araha.2716s0004 5.0kb upstream 5.0kb upstream 5000 false Scaffold2716: 4697-9696 Arabidopsis halleri
Araha.2716s0004 5.0kb downstream 5.0kb downstream 8445 true Scaffold2716: 9697-18141 Arabidopsis halleri
Araha.2716s0004 5.0kb downstream 5.0kb downstream 5000 false Scaffold2716: 13142-18141 Arabidopsis halleri
Araha.2716s0004 10.0kb upstream 10.0kb upstream 13141 true Scaffold2716: 1-13141 Arabidopsis halleri
Araha.2716s0004 10.0kb upstream 10.0kb upstream 9696 false Scaffold2716: 1-9696 Arabidopsis halleri
Araha.2716s0004 10.0kb downstream 10.0kb downstream 13445 true Scaffold2716: 9697-23141 Arabidopsis halleri
Araha.2716s0004 10.0kb downstream 10.0kb downstream 10000 false Scaffold2716: 13142-23141 Arabidopsis halleri

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122367003 5261 Brassicaceae View MSA
123828792 5264 Brassicales-Malvales View MSA
124338856 5266 SBM View MSA
124250884 5268 Malvidae View MSA
124072231 5270 Rosid View MSA
123753345 5271 Pentapetalae View MSA
122797917 5272 Eudicot View MSA
122051679 5273 Angiosperm View MSA
121351767 5274 Embryophyte View MSA
123382313 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain