Gene : Araha.5318s0011 A. halleri v1.1
Defline:  (1 of 1) PTHR10742:SF246 - LYSINE-SPECIFIC HISTONE DEMETHYLASE 1 HOMOLOG 1 Genomic Order:  11
Name:  ? Araha.5318s0011 Secondary Identifier:  ? PAC:28850070
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Ahalleri PWY-6441 Arabidopsis halleri pathologic  

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Araha.5318s0011 0.5kb upstream 0.5kb upstream 2617 true Scaffold5318: 45183-47799 Arabidopsis halleri
Araha.5318s0011 0.5kb upstream 0.5kb upstream 500 false Scaffold5318: 47300-47799 Arabidopsis halleri
Araha.5318s0011 0.5kb downstream 0.5kb downstream 2617 true Scaffold5318: 44683-47299 Arabidopsis halleri
Araha.5318s0011 0.5kb downstream 0.5kb downstream 500 false Scaffold5318: 44683-45182 Arabidopsis halleri
Araha.5318s0011 1.0kb upstream 1.0kb upstream 3117 true Scaffold5318: 45183-48299 Arabidopsis halleri
Araha.5318s0011 1.0kb upstream 1.0kb upstream 1000 false Scaffold5318: 47300-48299 Arabidopsis halleri
Araha.5318s0011 1.0kb downstream 1.0kb downstream 3117 true Scaffold5318: 44183-47299 Arabidopsis halleri
Araha.5318s0011 1.0kb downstream 1.0kb downstream 1000 false Scaffold5318: 44183-45182 Arabidopsis halleri
Araha.5318s0011 2.0kb upstream 2.0kb upstream 4117 true Scaffold5318: 45183-49299 Arabidopsis halleri
Araha.5318s0011 2.0kb upstream 2.0kb upstream 2000 false Scaffold5318: 47300-49299 Arabidopsis halleri
Araha.5318s0011 2.0kb downstream 2.0kb downstream 4117 true Scaffold5318: 43183-47299 Arabidopsis halleri
Araha.5318s0011 2.0kb downstream 2.0kb downstream 2000 false Scaffold5318: 43183-45182 Arabidopsis halleri
Araha.5318s0011 5.0kb upstream 5.0kb upstream 7117 true Scaffold5318: 45183-52299 Arabidopsis halleri
Araha.5318s0011 5.0kb upstream 5.0kb upstream 5000 false Scaffold5318: 47300-52299 Arabidopsis halleri
Araha.5318s0011 5.0kb downstream 5.0kb downstream 7117 true Scaffold5318: 40183-47299 Arabidopsis halleri
Araha.5318s0011 5.0kb downstream 5.0kb downstream 5000 false Scaffold5318: 40183-45182 Arabidopsis halleri
Araha.5318s0011 10.0kb upstream 10.0kb upstream 7548 true Scaffold5318: 45183-52730 Arabidopsis halleri
Araha.5318s0011 10.0kb upstream 10.0kb upstream 5431 false Scaffold5318: 47300-52730 Arabidopsis halleri
Araha.5318s0011 10.0kb downstream 10.0kb downstream 12117 true Scaffold5318: 35183-47299 Arabidopsis halleri
Araha.5318s0011 10.0kb downstream 10.0kb downstream 10000 false Scaffold5318: 35183-45182 Arabidopsis halleri

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122376165 5261 Brassicaceae View MSA
123829326 5264 Brassicales-Malvales View MSA
124336608 5266 SBM View MSA
124249535 5268 Malvidae View MSA
124062162 5270 Rosid View MSA
123738234 5271 Pentapetalae View MSA
122786001 5272 Eudicot View MSA
122043910 5273 Angiosperm View MSA
121310209 5274 Embryophyte View MSA
123428250 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain