Gene : Araha.4866s0001 A. halleri v1.1

Defline:  (1 of 4) PTHR33076:SF11 - BIFUNCTIONAL INHIBITOR/LIPID-TRANSFER PROTEIN/SEED STORAGE 2S ALBUMIN SUPERFAMILY PROTEIN-RELATED Genomic Order:  1
Name:  ? Araha.4866s0001 Secondary Identifier:  ? PAC:28855845

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Araha.4866s0001 0.5kb upstream 0.5kb upstream 1481 true Scaffold4866: 1215-2695 Arabidopsis halleri
Araha.4866s0001 0.5kb upstream 0.5kb upstream 500 false Scaffold4866: 2196-2695 Arabidopsis halleri
Araha.4866s0001 0.5kb downstream 0.5kb downstream 1481 true Scaffold4866: 715-2195 Arabidopsis halleri
Araha.4866s0001 0.5kb downstream 0.5kb downstream 500 false Scaffold4866: 715-1214 Arabidopsis halleri
Araha.4866s0001 1.0kb upstream 1.0kb upstream 1981 true Scaffold4866: 1215-3195 Arabidopsis halleri
Araha.4866s0001 1.0kb upstream 1.0kb upstream 1000 false Scaffold4866: 2196-3195 Arabidopsis halleri
Araha.4866s0001 1.0kb downstream 1.0kb downstream 1981 true Scaffold4866: 215-2195 Arabidopsis halleri
Araha.4866s0001 1.0kb downstream 1.0kb downstream 1000 false Scaffold4866: 215-1214 Arabidopsis halleri
Araha.4866s0001 2.0kb upstream 2.0kb upstream 2981 true Scaffold4866: 1215-4195 Arabidopsis halleri
Araha.4866s0001 2.0kb upstream 2.0kb upstream 2000 false Scaffold4866: 2196-4195 Arabidopsis halleri
Araha.4866s0001 2.0kb downstream 2.0kb downstream 2195 true Scaffold4866: 1-2195 Arabidopsis halleri
Araha.4866s0001 2.0kb downstream 2.0kb downstream 1214 false Scaffold4866: 1-1214 Arabidopsis halleri
Araha.4866s0001 5.0kb upstream 5.0kb upstream 5981 true Scaffold4866: 1215-7195 Arabidopsis halleri
Araha.4866s0001 5.0kb upstream 5.0kb upstream 5000 false Scaffold4866: 2196-7195 Arabidopsis halleri
Araha.4866s0001 5.0kb downstream 5.0kb downstream 2195 true Scaffold4866: 1-2195 Arabidopsis halleri
Araha.4866s0001 5.0kb downstream 5.0kb downstream 1214 false Scaffold4866: 1-1214 Arabidopsis halleri
Araha.4866s0001 10.0kb upstream 10.0kb upstream 10981 true Scaffold4866: 1215-12195 Arabidopsis halleri
Araha.4866s0001 10.0kb upstream 10.0kb upstream 10000 false Scaffold4866: 2196-12195 Arabidopsis halleri
Araha.4866s0001 10.0kb downstream 10.0kb downstream 2195 true Scaffold4866: 1-2195 Arabidopsis halleri
Araha.4866s0001 10.0kb downstream 10.0kb downstream 1214 false Scaffold4866: 1-1214 Arabidopsis halleri

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121486683 5273 Angiosperm Singleton cluster - no MSA
122320403 5261 Brassicaceae Singleton cluster - no MSA
123762003 5264 Brassicales-Malvales Singleton cluster - no MSA
124260638 5266 SBM Singleton cluster - no MSA
124117259 5268 Malvidae Singleton cluster - no MSA
123846651 5270 Rosid Singleton cluster - no MSA
123432932 5271 Pentapetalae Singleton cluster - no MSA
122468552 5272 Eudicot Singleton cluster - no MSA
120760077 5274 Embryophyte Singleton cluster - no MSA
122802536 5275 Viridiplantae Singleton cluster - no MSA

0 Rna Seq Expressions

0 Strain