Gene : Araha.3331s0002 A. halleri v1.1

Defline:  (1 of 1) PTHR15502 - CALCINEURIN-BINDING PROTEIN CABIN 1-RELATED Genomic Order:  2
Name:  ? Araha.3331s0002 Secondary Identifier:  ? PAC:28838503

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Araha.3331s0002 0.5kb upstream 0.5kb upstream 11038 true Scaffold3331: 3606-14643 Arabidopsis halleri
Araha.3331s0002 0.5kb upstream 0.5kb upstream 500 false Scaffold3331: 14144-14643 Arabidopsis halleri
Araha.3331s0002 0.5kb downstream 0.5kb downstream 11038 true Scaffold3331: 3106-14143 Arabidopsis halleri
Araha.3331s0002 0.5kb downstream 0.5kb downstream 500 false Scaffold3331: 3106-3605 Arabidopsis halleri
Araha.3331s0002 1.0kb upstream 1.0kb upstream 11538 true Scaffold3331: 3606-15143 Arabidopsis halleri
Araha.3331s0002 1.0kb upstream 1.0kb upstream 1000 false Scaffold3331: 14144-15143 Arabidopsis halleri
Araha.3331s0002 1.0kb downstream 1.0kb downstream 11538 true Scaffold3331: 2606-14143 Arabidopsis halleri
Araha.3331s0002 1.0kb downstream 1.0kb downstream 1000 false Scaffold3331: 2606-3605 Arabidopsis halleri
Araha.3331s0002 2.0kb upstream 2.0kb upstream 12538 true Scaffold3331: 3606-16143 Arabidopsis halleri
Araha.3331s0002 2.0kb upstream 2.0kb upstream 2000 false Scaffold3331: 14144-16143 Arabidopsis halleri
Araha.3331s0002 2.0kb downstream 2.0kb downstream 12538 true Scaffold3331: 1606-14143 Arabidopsis halleri
Araha.3331s0002 2.0kb downstream 2.0kb downstream 2000 false Scaffold3331: 1606-3605 Arabidopsis halleri
Araha.3331s0002 5.0kb upstream 5.0kb upstream 15538 true Scaffold3331: 3606-19143 Arabidopsis halleri
Araha.3331s0002 5.0kb upstream 5.0kb upstream 5000 false Scaffold3331: 14144-19143 Arabidopsis halleri
Araha.3331s0002 5.0kb downstream 5.0kb downstream 14143 true Scaffold3331: 1-14143 Arabidopsis halleri
Araha.3331s0002 5.0kb downstream 5.0kb downstream 3605 false Scaffold3331: 1-3605 Arabidopsis halleri
Araha.3331s0002 10.0kb upstream 10.0kb upstream 20538 true Scaffold3331: 3606-24143 Arabidopsis halleri
Araha.3331s0002 10.0kb upstream 10.0kb upstream 10000 false Scaffold3331: 14144-24143 Arabidopsis halleri
Araha.3331s0002 10.0kb downstream 10.0kb downstream 14143 true Scaffold3331: 1-14143 Arabidopsis halleri
Araha.3331s0002 10.0kb downstream 10.0kb downstream 3605 false Scaffold3331: 1-3605 Arabidopsis halleri

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122369379 5261 Brassicaceae View MSA
123831332 5264 Brassicales-Malvales View MSA
124340604 5266 SBM View MSA
124239413 5268 Malvidae View MSA
124066112 5270 Rosid View MSA
123740138 5271 Pentapetalae View MSA
122793127 5272 Eudicot View MSA
122042501 5273 Angiosperm View MSA
121348096 5274 Embryophyte View MSA
123424032 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain