Gene : Araha.3331s0005 A. halleri v1.1

Defline:  (1 of 4) PTHR13697:SF7 - 6-PHOSPHOFRUCTOKINASE 1-RELATED Genomic Order:  5
Name:  ? Araha.3331s0005 Secondary Identifier:  ? PAC:28838501

Sequence Feature Displayer

Ontology Annotation Displayer

4 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Ahalleri ANAEROFRUCAT-PWY Arabidopsis halleri pathologic  
Ahalleri ANAGLYCOLYSIS-PWY Arabidopsis halleri pathologic  
Ahalleri PWY-1042 Arabidopsis halleri pathologic  
Ahalleri PWY-5464 Arabidopsis halleri pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Araha.3331s0005 0.5kb upstream 0.5kb upstream 3971 true Scaffold3331: 22163-26133 Arabidopsis halleri
Araha.3331s0005 0.5kb upstream 0.5kb upstream 500 false Scaffold3331: 25634-26133 Arabidopsis halleri
Araha.3331s0005 0.5kb downstream 0.5kb downstream 3971 true Scaffold3331: 21663-25633 Arabidopsis halleri
Araha.3331s0005 0.5kb downstream 0.5kb downstream 500 false Scaffold3331: 21663-22162 Arabidopsis halleri
Araha.3331s0005 1.0kb upstream 1.0kb upstream 4471 true Scaffold3331: 22163-26633 Arabidopsis halleri
Araha.3331s0005 1.0kb upstream 1.0kb upstream 1000 false Scaffold3331: 25634-26633 Arabidopsis halleri
Araha.3331s0005 1.0kb downstream 1.0kb downstream 4471 true Scaffold3331: 21163-25633 Arabidopsis halleri
Araha.3331s0005 1.0kb downstream 1.0kb downstream 1000 false Scaffold3331: 21163-22162 Arabidopsis halleri
Araha.3331s0005 2.0kb upstream 2.0kb upstream 5471 true Scaffold3331: 22163-27633 Arabidopsis halleri
Araha.3331s0005 2.0kb upstream 2.0kb upstream 2000 false Scaffold3331: 25634-27633 Arabidopsis halleri
Araha.3331s0005 2.0kb downstream 2.0kb downstream 5471 true Scaffold3331: 20163-25633 Arabidopsis halleri
Araha.3331s0005 2.0kb downstream 2.0kb downstream 2000 false Scaffold3331: 20163-22162 Arabidopsis halleri
Araha.3331s0005 5.0kb upstream 5.0kb upstream 8471 true Scaffold3331: 22163-30633 Arabidopsis halleri
Araha.3331s0005 5.0kb upstream 5.0kb upstream 5000 false Scaffold3331: 25634-30633 Arabidopsis halleri
Araha.3331s0005 5.0kb downstream 5.0kb downstream 8471 true Scaffold3331: 17163-25633 Arabidopsis halleri
Araha.3331s0005 5.0kb downstream 5.0kb downstream 5000 false Scaffold3331: 17163-22162 Arabidopsis halleri
Araha.3331s0005 10.0kb upstream 10.0kb upstream 13471 true Scaffold3331: 22163-35633 Arabidopsis halleri
Araha.3331s0005 10.0kb upstream 10.0kb upstream 10000 false Scaffold3331: 25634-35633 Arabidopsis halleri
Araha.3331s0005 10.0kb downstream 10.0kb downstream 13471 true Scaffold3331: 12163-25633 Arabidopsis halleri
Araha.3331s0005 10.0kb downstream 10.0kb downstream 10000 false Scaffold3331: 12163-22162 Arabidopsis halleri

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122041124 5273 Angiosperm View MSA
122367046 5261 Brassicaceae View MSA
123799285 5264 Brassicales-Malvales View MSA
124296821 5266 SBM View MSA
124246868 5268 Malvidae View MSA
124069245 5270 Rosid View MSA
123747020 5271 Pentapetalae View MSA
122788773 5272 Eudicot View MSA
121349898 5274 Embryophyte View MSA
123428795 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain