Gene : Araha.0792s0001 A. halleri v1.1
Defline:  (1 of 2) PTHR10266 - CYTOCHROME C1 Genomic Order:  1
Name:  ? Araha.0792s0001 Secondary Identifier:  ? PAC:28850502
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Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Ahalleri PWY-3781 Arabidopsis halleri pathologic  
Ahalleri PWY-7279 Arabidopsis halleri pathologic  

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Araha.0792s0001 0.5kb upstream 0.5kb upstream 3222 true Scaffold792: 8912-12133 Arabidopsis halleri
Araha.0792s0001 0.5kb upstream 0.5kb upstream 500 false Scaffold792: 8912-9411 Arabidopsis halleri
Araha.0792s0001 0.5kb downstream 0.5kb downstream 3222 true Scaffold792: 9412-12633 Arabidopsis halleri
Araha.0792s0001 0.5kb downstream 0.5kb downstream 500 false Scaffold792: 12134-12633 Arabidopsis halleri
Araha.0792s0001 1.0kb upstream 1.0kb upstream 3722 true Scaffold792: 8412-12133 Arabidopsis halleri
Araha.0792s0001 1.0kb upstream 1.0kb upstream 1000 false Scaffold792: 8412-9411 Arabidopsis halleri
Araha.0792s0001 1.0kb downstream 1.0kb downstream 3722 true Scaffold792: 9412-13133 Arabidopsis halleri
Araha.0792s0001 1.0kb downstream 1.0kb downstream 1000 false Scaffold792: 12134-13133 Arabidopsis halleri
Araha.0792s0001 2.0kb upstream 2.0kb upstream 4722 true Scaffold792: 7412-12133 Arabidopsis halleri
Araha.0792s0001 2.0kb upstream 2.0kb upstream 2000 false Scaffold792: 7412-9411 Arabidopsis halleri
Araha.0792s0001 2.0kb downstream 2.0kb downstream 4722 true Scaffold792: 9412-14133 Arabidopsis halleri
Araha.0792s0001 2.0kb downstream 2.0kb downstream 2000 false Scaffold792: 12134-14133 Arabidopsis halleri
Araha.0792s0001 5.0kb upstream 5.0kb upstream 7722 true Scaffold792: 4412-12133 Arabidopsis halleri
Araha.0792s0001 5.0kb upstream 5.0kb upstream 5000 false Scaffold792: 4412-9411 Arabidopsis halleri
Araha.0792s0001 5.0kb downstream 5.0kb downstream 7722 true Scaffold792: 9412-17133 Arabidopsis halleri
Araha.0792s0001 5.0kb downstream 5.0kb downstream 5000 false Scaffold792: 12134-17133 Arabidopsis halleri
Araha.0792s0001 10.0kb upstream 10.0kb upstream 12133 true Scaffold792: 1-12133 Arabidopsis halleri
Araha.0792s0001 10.0kb upstream 10.0kb upstream 9411 false Scaffold792: 1-9411 Arabidopsis halleri
Araha.0792s0001 10.0kb downstream 10.0kb downstream 12722 true Scaffold792: 9412-22133 Arabidopsis halleri
Araha.0792s0001 10.0kb downstream 10.0kb downstream 10000 false Scaffold792: 12134-22133 Arabidopsis halleri

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122376312 5261 Brassicaceae View MSA
123830928 5264 Brassicales-Malvales View MSA
124345956 5266 SBM View MSA
124248685 5268 Malvidae View MSA
124073211 5270 Rosid View MSA
123745446 5271 Pentapetalae View MSA
122788425 5272 Eudicot View MSA
122048813 5273 Angiosperm View MSA
121344559 5274 Embryophyte View MSA
123427665 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain