Gene : Araha.24621s0002 A. halleri v1.1

Defline:  (1 of 1) PTHR23198:SF0 - NUCLEAR PORE COMPLEX PROTEIN NUP96 HOMOLOG Genomic Order:  2
Name:  ? Araha.24621s0002 Secondary Identifier:  ? PAC:28844616

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Araha.24621s0002 0.5kb upstream 0.5kb upstream 5198 true Scaffold24621: 3147-8344 Arabidopsis halleri
Araha.24621s0002 0.5kb upstream 0.5kb upstream 500 false Scaffold24621: 3147-3646 Arabidopsis halleri
Araha.24621s0002 0.5kb downstream 0.5kb downstream 5198 true Scaffold24621: 3647-8844 Arabidopsis halleri
Araha.24621s0002 0.5kb downstream 0.5kb downstream 500 false Scaffold24621: 8345-8844 Arabidopsis halleri
Araha.24621s0002 1.0kb upstream 1.0kb upstream 5698 true Scaffold24621: 2647-8344 Arabidopsis halleri
Araha.24621s0002 1.0kb upstream 1.0kb upstream 1000 false Scaffold24621: 2647-3646 Arabidopsis halleri
Araha.24621s0002 1.0kb downstream 1.0kb downstream 5698 true Scaffold24621: 3647-9344 Arabidopsis halleri
Araha.24621s0002 1.0kb downstream 1.0kb downstream 1000 false Scaffold24621: 8345-9344 Arabidopsis halleri
Araha.24621s0002 2.0kb upstream 2.0kb upstream 6698 true Scaffold24621: 1647-8344 Arabidopsis halleri
Araha.24621s0002 2.0kb upstream 2.0kb upstream 2000 false Scaffold24621: 1647-3646 Arabidopsis halleri
Araha.24621s0002 2.0kb downstream 2.0kb downstream 6680 true Scaffold24621: 3647-10326 Arabidopsis halleri
Araha.24621s0002 2.0kb downstream 2.0kb downstream 1982 false Scaffold24621: 8345-10326 Arabidopsis halleri
Araha.24621s0002 5.0kb upstream 5.0kb upstream 8344 true Scaffold24621: 1-8344 Arabidopsis halleri
Araha.24621s0002 5.0kb upstream 5.0kb upstream 3646 false Scaffold24621: 1-3646 Arabidopsis halleri
Araha.24621s0002 5.0kb downstream 5.0kb downstream 6680 true Scaffold24621: 3647-10326 Arabidopsis halleri
Araha.24621s0002 5.0kb downstream 5.0kb downstream 1982 false Scaffold24621: 8345-10326 Arabidopsis halleri
Araha.24621s0002 10.0kb upstream 10.0kb upstream 8344 true Scaffold24621: 1-8344 Arabidopsis halleri
Araha.24621s0002 10.0kb upstream 10.0kb upstream 3646 false Scaffold24621: 1-3646 Arabidopsis halleri
Araha.24621s0002 10.0kb downstream 10.0kb downstream 6680 true Scaffold24621: 3647-10326 Arabidopsis halleri
Araha.24621s0002 10.0kb downstream 10.0kb downstream 1982 false Scaffold24621: 8345-10326 Arabidopsis halleri

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122360570 5261 Brassicaceae View MSA
123833721 5264 Brassicales-Malvales View MSA
124337960 5266 SBM View MSA
124238103 5268 Malvidae View MSA
124062118 5270 Rosid View MSA
123738828 5271 Pentapetalae View MSA
122786921 5272 Eudicot View MSA
122043247 5273 Angiosperm View MSA
121310093 5274 Embryophyte View MSA
123347679 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain