Gene : Araha.1832s0002 A. halleri v1.1

Defline:  (1 of 1) KOG4438 - Centromere-associated protein NUF2 Genomic Order:  2
Name:  ? Araha.1832s0002 Secondary Identifier:  ? PAC:28859846

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Araha.1832s0002 0.5kb upstream 0.5kb upstream 3981 true Scaffold1832: 2917-6897 Arabidopsis halleri
Araha.1832s0002 0.5kb upstream 0.5kb upstream 500 false Scaffold1832: 6398-6897 Arabidopsis halleri
Araha.1832s0002 0.5kb downstream 0.5kb downstream 3981 true Scaffold1832: 2417-6397 Arabidopsis halleri
Araha.1832s0002 0.5kb downstream 0.5kb downstream 500 false Scaffold1832: 2417-2916 Arabidopsis halleri
Araha.1832s0002 1.0kb upstream 1.0kb upstream 4481 true Scaffold1832: 2917-7397 Arabidopsis halleri
Araha.1832s0002 1.0kb upstream 1.0kb upstream 1000 false Scaffold1832: 6398-7397 Arabidopsis halleri
Araha.1832s0002 1.0kb downstream 1.0kb downstream 4481 true Scaffold1832: 1917-6397 Arabidopsis halleri
Araha.1832s0002 1.0kb downstream 1.0kb downstream 1000 false Scaffold1832: 1917-2916 Arabidopsis halleri
Araha.1832s0002 2.0kb upstream 2.0kb upstream 5481 true Scaffold1832: 2917-8397 Arabidopsis halleri
Araha.1832s0002 2.0kb upstream 2.0kb upstream 2000 false Scaffold1832: 6398-8397 Arabidopsis halleri
Araha.1832s0002 2.0kb downstream 2.0kb downstream 5481 true Scaffold1832: 917-6397 Arabidopsis halleri
Araha.1832s0002 2.0kb downstream 2.0kb downstream 2000 false Scaffold1832: 917-2916 Arabidopsis halleri
Araha.1832s0002 5.0kb upstream 5.0kb upstream 8481 true Scaffold1832: 2917-11397 Arabidopsis halleri
Araha.1832s0002 5.0kb upstream 5.0kb upstream 5000 false Scaffold1832: 6398-11397 Arabidopsis halleri
Araha.1832s0002 5.0kb downstream 5.0kb downstream 6397 true Scaffold1832: 1-6397 Arabidopsis halleri
Araha.1832s0002 5.0kb downstream 5.0kb downstream 2916 false Scaffold1832: 1-2916 Arabidopsis halleri
Araha.1832s0002 10.0kb upstream 10.0kb upstream 13481 true Scaffold1832: 2917-16397 Arabidopsis halleri
Araha.1832s0002 10.0kb upstream 10.0kb upstream 10000 false Scaffold1832: 6398-16397 Arabidopsis halleri
Araha.1832s0002 10.0kb downstream 10.0kb downstream 6397 true Scaffold1832: 1-6397 Arabidopsis halleri
Araha.1832s0002 10.0kb downstream 10.0kb downstream 2916 false Scaffold1832: 1-2916 Arabidopsis halleri

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121487747 5273 Angiosperm Singleton cluster - no MSA
122321479 5261 Brassicaceae Singleton cluster - no MSA
123763074 5264 Brassicales-Malvales Singleton cluster - no MSA
124261709 5266 SBM Singleton cluster - no MSA
124118328 5268 Malvidae Singleton cluster - no MSA
123847718 5270 Rosid Singleton cluster - no MSA
123433998 5271 Pentapetalae Singleton cluster - no MSA
122469618 5272 Eudicot Singleton cluster - no MSA
120761136 5274 Embryophyte Singleton cluster - no MSA
122803579 5275 Viridiplantae Singleton cluster - no MSA

0 Rna Seq Expressions

0 Strain