Gene : Araha.1832s0003 A. halleri v1.1

Defline:  (1 of 2) PTHR21650:SF2 - KINETOCHORE PROTEIN NUF2 Genomic Order:  3
Name:  ? Araha.1832s0003 Secondary Identifier:  ? PAC:28859839

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Araha.1832s0003 0.5kb upstream 0.5kb upstream 10493 true Scaffold1832: 6413-16905 Arabidopsis halleri
Araha.1832s0003 0.5kb upstream 0.5kb upstream 500 false Scaffold1832: 16406-16905 Arabidopsis halleri
Araha.1832s0003 0.5kb downstream 0.5kb downstream 10493 true Scaffold1832: 5913-16405 Arabidopsis halleri
Araha.1832s0003 0.5kb downstream 0.5kb downstream 500 false Scaffold1832: 5913-6412 Arabidopsis halleri
Araha.1832s0003 1.0kb upstream 1.0kb upstream 10993 true Scaffold1832: 6413-17405 Arabidopsis halleri
Araha.1832s0003 1.0kb upstream 1.0kb upstream 1000 false Scaffold1832: 16406-17405 Arabidopsis halleri
Araha.1832s0003 1.0kb downstream 1.0kb downstream 10993 true Scaffold1832: 5413-16405 Arabidopsis halleri
Araha.1832s0003 1.0kb downstream 1.0kb downstream 1000 false Scaffold1832: 5413-6412 Arabidopsis halleri
Araha.1832s0003 2.0kb upstream 2.0kb upstream 11993 true Scaffold1832: 6413-18405 Arabidopsis halleri
Araha.1832s0003 2.0kb upstream 2.0kb upstream 2000 false Scaffold1832: 16406-18405 Arabidopsis halleri
Araha.1832s0003 2.0kb downstream 2.0kb downstream 11993 true Scaffold1832: 4413-16405 Arabidopsis halleri
Araha.1832s0003 2.0kb downstream 2.0kb downstream 2000 false Scaffold1832: 4413-6412 Arabidopsis halleri
Araha.1832s0003 5.0kb upstream 5.0kb upstream 14993 true Scaffold1832: 6413-21405 Arabidopsis halleri
Araha.1832s0003 5.0kb upstream 5.0kb upstream 5000 false Scaffold1832: 16406-21405 Arabidopsis halleri
Araha.1832s0003 5.0kb downstream 5.0kb downstream 14993 true Scaffold1832: 1413-16405 Arabidopsis halleri
Araha.1832s0003 5.0kb downstream 5.0kb downstream 5000 false Scaffold1832: 1413-6412 Arabidopsis halleri
Araha.1832s0003 10.0kb upstream 10.0kb upstream 19993 true Scaffold1832: 6413-26405 Arabidopsis halleri
Araha.1832s0003 10.0kb upstream 10.0kb upstream 10000 false Scaffold1832: 16406-26405 Arabidopsis halleri
Araha.1832s0003 10.0kb downstream 10.0kb downstream 16405 true Scaffold1832: 1-16405 Arabidopsis halleri
Araha.1832s0003 10.0kb downstream 10.0kb downstream 6412 false Scaffold1832: 1-6412 Arabidopsis halleri

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121487745 5273 Angiosperm Singleton cluster - no MSA
122321477 5261 Brassicaceae Singleton cluster - no MSA
123763072 5264 Brassicales-Malvales Singleton cluster - no MSA
124261707 5266 SBM Singleton cluster - no MSA
124118326 5268 Malvidae Singleton cluster - no MSA
123847716 5270 Rosid Singleton cluster - no MSA
123433996 5271 Pentapetalae Singleton cluster - no MSA
122469616 5272 Eudicot Singleton cluster - no MSA
120761134 5274 Embryophyte Singleton cluster - no MSA
122803577 5275 Viridiplantae Singleton cluster - no MSA

0 Rna Seq Expressions

0 Strain