Gene : Araha.1835s0008 A. halleri v1.1

Defline:  (1 of 1) PTHR23244:SF249 - MANNOSE-BINDING LECTIN SUPERFAMILY PROTEIN Genomic Order:  8
Name:  ? Araha.1835s0008 Secondary Identifier:  ? PAC:28845690

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Araha.1835s0008 0.5kb upstream 0.5kb upstream 2986 true Scaffold1835: 33607-36592 Arabidopsis halleri
Araha.1835s0008 0.5kb upstream 0.5kb upstream 500 false Scaffold1835: 33607-34106 Arabidopsis halleri
Araha.1835s0008 0.5kb downstream 0.5kb downstream 2986 true Scaffold1835: 34107-37092 Arabidopsis halleri
Araha.1835s0008 0.5kb downstream 0.5kb downstream 500 false Scaffold1835: 36593-37092 Arabidopsis halleri
Araha.1835s0008 1.0kb upstream 1.0kb upstream 3486 true Scaffold1835: 33107-36592 Arabidopsis halleri
Araha.1835s0008 1.0kb upstream 1.0kb upstream 1000 false Scaffold1835: 33107-34106 Arabidopsis halleri
Araha.1835s0008 1.0kb downstream 1.0kb downstream 3486 true Scaffold1835: 34107-37592 Arabidopsis halleri
Araha.1835s0008 1.0kb downstream 1.0kb downstream 1000 false Scaffold1835: 36593-37592 Arabidopsis halleri
Araha.1835s0008 2.0kb upstream 2.0kb upstream 4486 true Scaffold1835: 32107-36592 Arabidopsis halleri
Araha.1835s0008 2.0kb upstream 2.0kb upstream 2000 false Scaffold1835: 32107-34106 Arabidopsis halleri
Araha.1835s0008 2.0kb downstream 2.0kb downstream 4486 true Scaffold1835: 34107-38592 Arabidopsis halleri
Araha.1835s0008 2.0kb downstream 2.0kb downstream 2000 false Scaffold1835: 36593-38592 Arabidopsis halleri
Araha.1835s0008 5.0kb upstream 5.0kb upstream 7486 true Scaffold1835: 29107-36592 Arabidopsis halleri
Araha.1835s0008 5.0kb upstream 5.0kb upstream 5000 false Scaffold1835: 29107-34106 Arabidopsis halleri
Araha.1835s0008 5.0kb downstream 5.0kb downstream 7486 true Scaffold1835: 34107-41592 Arabidopsis halleri
Araha.1835s0008 5.0kb downstream 5.0kb downstream 5000 false Scaffold1835: 36593-41592 Arabidopsis halleri
Araha.1835s0008 10.0kb upstream 10.0kb upstream 12486 true Scaffold1835: 24107-36592 Arabidopsis halleri
Araha.1835s0008 10.0kb upstream 10.0kb upstream 10000 false Scaffold1835: 24107-34106 Arabidopsis halleri
Araha.1835s0008 10.0kb downstream 10.0kb downstream 12486 true Scaffold1835: 34107-46592 Arabidopsis halleri
Araha.1835s0008 10.0kb downstream 10.0kb downstream 10000 false Scaffold1835: 36593-46592 Arabidopsis halleri

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122361263 5261 Brassicaceae View MSA
123834745 5264 Brassicales-Malvales View MSA
124344777 5266 SBM View MSA
124252424 5268 Malvidae View MSA
124064423 5270 Rosid View MSA
123753130 5271 Pentapetalae View MSA
122797480 5272 Eudicot View MSA
122051624 5273 Angiosperm View MSA
121351046 5274 Embryophyte View MSA
123381988 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain