Gene : Araha.1845s0002 A. halleri v1.1
Defline:  (1 of 1) 1.14.13.122 - Chlorophyllide-a oxygenase / Cholorophyll-b synthase Genomic Order:  2
Name:  ? Araha.1845s0002 Secondary Identifier:  ? PAC:28861453
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1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Ahalleri PWY-5068 Arabidopsis halleri pathologic  

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Araha.1845s0002 0.5kb upstream 0.5kb upstream 3402 true Scaffold1845: 6558-9959 Arabidopsis halleri
Araha.1845s0002 0.5kb upstream 0.5kb upstream 500 false Scaffold1845: 9460-9959 Arabidopsis halleri
Araha.1845s0002 0.5kb downstream 0.5kb downstream 3402 true Scaffold1845: 6058-9459 Arabidopsis halleri
Araha.1845s0002 0.5kb downstream 0.5kb downstream 500 false Scaffold1845: 6058-6557 Arabidopsis halleri
Araha.1845s0002 1.0kb upstream 1.0kb upstream 3902 true Scaffold1845: 6558-10459 Arabidopsis halleri
Araha.1845s0002 1.0kb upstream 1.0kb upstream 1000 false Scaffold1845: 9460-10459 Arabidopsis halleri
Araha.1845s0002 1.0kb downstream 1.0kb downstream 3902 true Scaffold1845: 5558-9459 Arabidopsis halleri
Araha.1845s0002 1.0kb downstream 1.0kb downstream 1000 false Scaffold1845: 5558-6557 Arabidopsis halleri
Araha.1845s0002 2.0kb upstream 2.0kb upstream 4902 true Scaffold1845: 6558-11459 Arabidopsis halleri
Araha.1845s0002 2.0kb upstream 2.0kb upstream 2000 false Scaffold1845: 9460-11459 Arabidopsis halleri
Araha.1845s0002 2.0kb downstream 2.0kb downstream 4902 true Scaffold1845: 4558-9459 Arabidopsis halleri
Araha.1845s0002 2.0kb downstream 2.0kb downstream 2000 false Scaffold1845: 4558-6557 Arabidopsis halleri
Araha.1845s0002 5.0kb upstream 5.0kb upstream 7902 true Scaffold1845: 6558-14459 Arabidopsis halleri
Araha.1845s0002 5.0kb upstream 5.0kb upstream 5000 false Scaffold1845: 9460-14459 Arabidopsis halleri
Araha.1845s0002 5.0kb downstream 5.0kb downstream 7902 true Scaffold1845: 1558-9459 Arabidopsis halleri
Araha.1845s0002 5.0kb downstream 5.0kb downstream 5000 false Scaffold1845: 1558-6557 Arabidopsis halleri
Araha.1845s0002 10.0kb upstream 10.0kb upstream 12902 true Scaffold1845: 6558-19459 Arabidopsis halleri
Araha.1845s0002 10.0kb upstream 10.0kb upstream 10000 false Scaffold1845: 9460-19459 Arabidopsis halleri
Araha.1845s0002 10.0kb downstream 10.0kb downstream 9459 true Scaffold1845: 1-9459 Arabidopsis halleri
Araha.1845s0002 10.0kb downstream 10.0kb downstream 6557 false Scaffold1845: 1-6557 Arabidopsis halleri

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122361363 5261 Brassicaceae View MSA
123838199 5264 Brassicales-Malvales View MSA
124342247 5266 SBM View MSA
124242720 5268 Malvidae View MSA
124067782 5270 Rosid View MSA
123744269 5271 Pentapetalae View MSA
122787506 5272 Eudicot View MSA
122048070 5273 Angiosperm View MSA
123429167 5275 Viridiplantae View MSA
121348979 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain