Gene : Araha.2474s0006 A. halleri v1.1

Defline:  (1 of 75) PF00917 - MATH domain (MATH) Genomic Order:  6
Name:  ? Araha.2474s0006 Secondary Identifier:  ? PAC:28841442

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Araha.2474s0006 0.5kb upstream 0.5kb upstream 1467 true Scaffold2474: 17005-18471 Arabidopsis halleri
Araha.2474s0006 0.5kb upstream 0.5kb upstream 500 false Scaffold2474: 17972-18471 Arabidopsis halleri
Araha.2474s0006 0.5kb downstream 0.5kb downstream 1467 true Scaffold2474: 16505-17971 Arabidopsis halleri
Araha.2474s0006 0.5kb downstream 0.5kb downstream 500 false Scaffold2474: 16505-17004 Arabidopsis halleri
Araha.2474s0006 1.0kb upstream 1.0kb upstream 1967 true Scaffold2474: 17005-18971 Arabidopsis halleri
Araha.2474s0006 1.0kb upstream 1.0kb upstream 1000 false Scaffold2474: 17972-18971 Arabidopsis halleri
Araha.2474s0006 1.0kb downstream 1.0kb downstream 1967 true Scaffold2474: 16005-17971 Arabidopsis halleri
Araha.2474s0006 1.0kb downstream 1.0kb downstream 1000 false Scaffold2474: 16005-17004 Arabidopsis halleri
Araha.2474s0006 2.0kb upstream 2.0kb upstream 2967 true Scaffold2474: 17005-19971 Arabidopsis halleri
Araha.2474s0006 2.0kb upstream 2.0kb upstream 2000 false Scaffold2474: 17972-19971 Arabidopsis halleri
Araha.2474s0006 2.0kb downstream 2.0kb downstream 2967 true Scaffold2474: 15005-17971 Arabidopsis halleri
Araha.2474s0006 2.0kb downstream 2.0kb downstream 2000 false Scaffold2474: 15005-17004 Arabidopsis halleri
Araha.2474s0006 5.0kb upstream 5.0kb upstream 5967 true Scaffold2474: 17005-22971 Arabidopsis halleri
Araha.2474s0006 5.0kb upstream 5.0kb upstream 5000 false Scaffold2474: 17972-22971 Arabidopsis halleri
Araha.2474s0006 5.0kb downstream 5.0kb downstream 5967 true Scaffold2474: 12005-17971 Arabidopsis halleri
Araha.2474s0006 5.0kb downstream 5.0kb downstream 5000 false Scaffold2474: 12005-17004 Arabidopsis halleri
Araha.2474s0006 10.0kb upstream 10.0kb upstream 10967 true Scaffold2474: 17005-27971 Arabidopsis halleri
Araha.2474s0006 10.0kb upstream 10.0kb upstream 10000 false Scaffold2474: 17972-27971 Arabidopsis halleri
Araha.2474s0006 10.0kb downstream 10.0kb downstream 10967 true Scaffold2474: 7005-17971 Arabidopsis halleri
Araha.2474s0006 10.0kb downstream 10.0kb downstream 10000 false Scaffold2474: 7005-17004 Arabidopsis halleri

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121483993 5273 Angiosperm Singleton cluster - no MSA
122317708 5261 Brassicaceae Singleton cluster - no MSA
123759308 5264 Brassicales-Malvales Singleton cluster - no MSA
124257943 5266 SBM Singleton cluster - no MSA
124114566 5268 Malvidae Singleton cluster - no MSA
123843958 5270 Rosid Singleton cluster - no MSA
123430241 5271 Pentapetalae Singleton cluster - no MSA
122465862 5272 Eudicot Singleton cluster - no MSA
120757388 5274 Embryophyte Singleton cluster - no MSA
122799848 5275 Viridiplantae Singleton cluster - no MSA

0 Rna Seq Expressions

0 Strain