Gene : Araha.17986s0001 A. halleri v1.1
Defline:  (1 of 1) PTHR31375:SF13 - PECTIN LYASE-LIKE PROTEIN Genomic Order:  1
Name:  ? Araha.17986s0001 Secondary Identifier:  ? PAC:28841037
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Ahalleri PWY-1081 Arabidopsis halleri pathologic  

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Araha.17986s0001 0.5kb upstream 0.5kb upstream 2866 true Scaffold17986: 4726-7591 Arabidopsis halleri
Araha.17986s0001 0.5kb upstream 0.5kb upstream 500 false Scaffold17986: 7092-7591 Arabidopsis halleri
Araha.17986s0001 0.5kb downstream 0.5kb downstream 2866 true Scaffold17986: 4226-7091 Arabidopsis halleri
Araha.17986s0001 0.5kb downstream 0.5kb downstream 500 false Scaffold17986: 4226-4725 Arabidopsis halleri
Araha.17986s0001 1.0kb upstream 1.0kb upstream 3366 true Scaffold17986: 4726-8091 Arabidopsis halleri
Araha.17986s0001 1.0kb upstream 1.0kb upstream 1000 false Scaffold17986: 7092-8091 Arabidopsis halleri
Araha.17986s0001 1.0kb downstream 1.0kb downstream 3366 true Scaffold17986: 3726-7091 Arabidopsis halleri
Araha.17986s0001 1.0kb downstream 1.0kb downstream 1000 false Scaffold17986: 3726-4725 Arabidopsis halleri
Araha.17986s0001 2.0kb upstream 2.0kb upstream 4366 true Scaffold17986: 4726-9091 Arabidopsis halleri
Araha.17986s0001 2.0kb upstream 2.0kb upstream 2000 false Scaffold17986: 7092-9091 Arabidopsis halleri
Araha.17986s0001 2.0kb downstream 2.0kb downstream 4366 true Scaffold17986: 2726-7091 Arabidopsis halleri
Araha.17986s0001 2.0kb downstream 2.0kb downstream 2000 false Scaffold17986: 2726-4725 Arabidopsis halleri
Araha.17986s0001 5.0kb upstream 5.0kb upstream 7366 true Scaffold17986: 4726-12091 Arabidopsis halleri
Araha.17986s0001 5.0kb upstream 5.0kb upstream 5000 false Scaffold17986: 7092-12091 Arabidopsis halleri
Araha.17986s0001 5.0kb downstream 5.0kb downstream 7091 true Scaffold17986: 1-7091 Arabidopsis halleri
Araha.17986s0001 5.0kb downstream 5.0kb downstream 4725 false Scaffold17986: 1-4725 Arabidopsis halleri
Araha.17986s0001 10.0kb upstream 10.0kb upstream 10021 true Scaffold17986: 4726-14746 Arabidopsis halleri
Araha.17986s0001 10.0kb upstream 10.0kb upstream 7655 false Scaffold17986: 7092-14746 Arabidopsis halleri
Araha.17986s0001 10.0kb downstream 10.0kb downstream 7091 true Scaffold17986: 1-7091 Arabidopsis halleri
Araha.17986s0001 10.0kb downstream 10.0kb downstream 4725 false Scaffold17986: 1-4725 Arabidopsis halleri

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122363483 5261 Brassicaceae View MSA
123840390 5264 Brassicales-Malvales View MSA
124322712 5266 SBM View MSA
124250647 5268 Malvidae View MSA
124071309 5270 Rosid View MSA
123746353 5271 Pentapetalae View MSA
122791695 5272 Eudicot View MSA
122048646 5273 Angiosperm View MSA
121350352 5274 Embryophyte View MSA
123381691 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain