Gene : Araha.1272s0013 A. halleri v1.1

Defline:  (1 of 2) PTHR15454 - NISCHARIN RELATED Genomic Order:  13
Name:  ? Araha.1272s0013 Secondary Identifier:  ? PAC:28847817

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Araha.1272s0013 0.5kb upstream 0.5kb upstream 5823 true Scaffold1272: 53509-59331 Arabidopsis halleri
Araha.1272s0013 0.5kb upstream 0.5kb upstream 500 false Scaffold1272: 53509-54008 Arabidopsis halleri
Araha.1272s0013 0.5kb downstream 0.5kb downstream 5823 true Scaffold1272: 54009-59831 Arabidopsis halleri
Araha.1272s0013 0.5kb downstream 0.5kb downstream 500 false Scaffold1272: 59332-59831 Arabidopsis halleri
Araha.1272s0013 1.0kb upstream 1.0kb upstream 6323 true Scaffold1272: 53009-59331 Arabidopsis halleri
Araha.1272s0013 1.0kb upstream 1.0kb upstream 1000 false Scaffold1272: 53009-54008 Arabidopsis halleri
Araha.1272s0013 1.0kb downstream 1.0kb downstream 6323 true Scaffold1272: 54009-60331 Arabidopsis halleri
Araha.1272s0013 1.0kb downstream 1.0kb downstream 1000 false Scaffold1272: 59332-60331 Arabidopsis halleri
Araha.1272s0013 2.0kb upstream 2.0kb upstream 7323 true Scaffold1272: 52009-59331 Arabidopsis halleri
Araha.1272s0013 2.0kb upstream 2.0kb upstream 2000 false Scaffold1272: 52009-54008 Arabidopsis halleri
Araha.1272s0013 2.0kb downstream 2.0kb downstream 7323 true Scaffold1272: 54009-61331 Arabidopsis halleri
Araha.1272s0013 2.0kb downstream 2.0kb downstream 2000 false Scaffold1272: 59332-61331 Arabidopsis halleri
Araha.1272s0013 5.0kb upstream 5.0kb upstream 10323 true Scaffold1272: 49009-59331 Arabidopsis halleri
Araha.1272s0013 5.0kb upstream 5.0kb upstream 5000 false Scaffold1272: 49009-54008 Arabidopsis halleri
Araha.1272s0013 5.0kb downstream 5.0kb downstream 9926 true Scaffold1272: 54009-63934 Arabidopsis halleri
Araha.1272s0013 5.0kb downstream 5.0kb downstream 4603 false Scaffold1272: 59332-63934 Arabidopsis halleri
Araha.1272s0013 10.0kb upstream 10.0kb upstream 15323 true Scaffold1272: 44009-59331 Arabidopsis halleri
Araha.1272s0013 10.0kb upstream 10.0kb upstream 10000 false Scaffold1272: 44009-54008 Arabidopsis halleri
Araha.1272s0013 10.0kb downstream 10.0kb downstream 9926 true Scaffold1272: 54009-63934 Arabidopsis halleri
Araha.1272s0013 10.0kb downstream 10.0kb downstream 4603 false Scaffold1272: 59332-63934 Arabidopsis halleri

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122366639 5261 Brassicaceae View MSA
123836421 5264 Brassicales-Malvales View MSA
124337466 5266 SBM View MSA
124240168 5268 Malvidae View MSA
124068979 5270 Rosid View MSA
123746713 5271 Pentapetalae View MSA
122789922 5272 Eudicot View MSA
122043032 5273 Angiosperm View MSA
121348804 5274 Embryophyte View MSA
123427587 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain