Gene : Araha.1283s0007 A. halleri v1.1

Defline:  (1 of 4) PTHR18896:SF65 - PHOSPHOLIPASE D BETA 1-RELATED Genomic Order:  7
Name:  ? Araha.1283s0007 Secondary Identifier:  ? PAC:28841256

Sequence Feature Displayer

Ontology Annotation Displayer

3 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Ahalleri LIPASYN-PWY Arabidopsis halleri pathologic  
Ahalleri PWY-3561 Arabidopsis halleri pathologic  
Ahalleri PWY-7039 Arabidopsis halleri pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Araha.1283s0007 0.5kb upstream 0.5kb upstream 4624 true Scaffold1283: 18324-22947 Arabidopsis halleri
Araha.1283s0007 0.5kb upstream 0.5kb upstream 500 false Scaffold1283: 18324-18823 Arabidopsis halleri
Araha.1283s0007 0.5kb downstream 0.5kb downstream 4624 true Scaffold1283: 18824-23447 Arabidopsis halleri
Araha.1283s0007 0.5kb downstream 0.5kb downstream 500 false Scaffold1283: 22948-23447 Arabidopsis halleri
Araha.1283s0007 1.0kb upstream 1.0kb upstream 5124 true Scaffold1283: 17824-22947 Arabidopsis halleri
Araha.1283s0007 1.0kb upstream 1.0kb upstream 1000 false Scaffold1283: 17824-18823 Arabidopsis halleri
Araha.1283s0007 1.0kb downstream 1.0kb downstream 5124 true Scaffold1283: 18824-23947 Arabidopsis halleri
Araha.1283s0007 1.0kb downstream 1.0kb downstream 1000 false Scaffold1283: 22948-23947 Arabidopsis halleri
Araha.1283s0007 2.0kb upstream 2.0kb upstream 6124 true Scaffold1283: 16824-22947 Arabidopsis halleri
Araha.1283s0007 2.0kb upstream 2.0kb upstream 2000 false Scaffold1283: 16824-18823 Arabidopsis halleri
Araha.1283s0007 2.0kb downstream 2.0kb downstream 6124 true Scaffold1283: 18824-24947 Arabidopsis halleri
Araha.1283s0007 2.0kb downstream 2.0kb downstream 2000 false Scaffold1283: 22948-24947 Arabidopsis halleri
Araha.1283s0007 5.0kb upstream 5.0kb upstream 9124 true Scaffold1283: 13824-22947 Arabidopsis halleri
Araha.1283s0007 5.0kb upstream 5.0kb upstream 5000 false Scaffold1283: 13824-18823 Arabidopsis halleri
Araha.1283s0007 5.0kb downstream 5.0kb downstream 9124 true Scaffold1283: 18824-27947 Arabidopsis halleri
Araha.1283s0007 5.0kb downstream 5.0kb downstream 5000 false Scaffold1283: 22948-27947 Arabidopsis halleri
Araha.1283s0007 10.0kb upstream 10.0kb upstream 14124 true Scaffold1283: 8824-22947 Arabidopsis halleri
Araha.1283s0007 10.0kb upstream 10.0kb upstream 10000 false Scaffold1283: 8824-18823 Arabidopsis halleri
Araha.1283s0007 10.0kb downstream 10.0kb downstream 12455 true Scaffold1283: 18824-31278 Arabidopsis halleri
Araha.1283s0007 10.0kb downstream 10.0kb downstream 8331 false Scaffold1283: 22948-31278 Arabidopsis halleri

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122378789 5261 Brassicaceae View MSA
123801991 5264 Brassicales-Malvales View MSA
124299223 5266 SBM View MSA
124150695 5268 Malvidae View MSA
123876266 5270 Rosid View MSA
123749008 5271 Pentapetalae View MSA
122790888 5272 Eudicot View MSA
122043294 5273 Angiosperm View MSA
121349961 5274 Embryophyte View MSA
123381517 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain