Gene : Araha.1283s0006 A. halleri v1.1
Defline:  (1 of 2) PTHR30566:SF5 - MECHANOSENSITIVE ION CHANNEL PROTEIN 1, MITOCHONDRIAL Genomic Order:  6
Name:  ? Araha.1283s0006 Secondary Identifier:  ? PAC:28841249
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Araha.1283s0006 0.5kb upstream 0.5kb upstream 1820 true Scaffold1283: 14705-16524 Arabidopsis halleri
Araha.1283s0006 0.5kb upstream 0.5kb upstream 500 false Scaffold1283: 14705-15204 Arabidopsis halleri
Araha.1283s0006 0.5kb downstream 0.5kb downstream 1820 true Scaffold1283: 15205-17024 Arabidopsis halleri
Araha.1283s0006 0.5kb downstream 0.5kb downstream 500 false Scaffold1283: 16525-17024 Arabidopsis halleri
Araha.1283s0006 1.0kb upstream 1.0kb upstream 2320 true Scaffold1283: 14205-16524 Arabidopsis halleri
Araha.1283s0006 1.0kb upstream 1.0kb upstream 1000 false Scaffold1283: 14205-15204 Arabidopsis halleri
Araha.1283s0006 1.0kb downstream 1.0kb downstream 2320 true Scaffold1283: 15205-17524 Arabidopsis halleri
Araha.1283s0006 1.0kb downstream 1.0kb downstream 1000 false Scaffold1283: 16525-17524 Arabidopsis halleri
Araha.1283s0006 2.0kb upstream 2.0kb upstream 3320 true Scaffold1283: 13205-16524 Arabidopsis halleri
Araha.1283s0006 2.0kb upstream 2.0kb upstream 2000 false Scaffold1283: 13205-15204 Arabidopsis halleri
Araha.1283s0006 2.0kb downstream 2.0kb downstream 3320 true Scaffold1283: 15205-18524 Arabidopsis halleri
Araha.1283s0006 2.0kb downstream 2.0kb downstream 2000 false Scaffold1283: 16525-18524 Arabidopsis halleri
Araha.1283s0006 5.0kb upstream 5.0kb upstream 6320 true Scaffold1283: 10205-16524 Arabidopsis halleri
Araha.1283s0006 5.0kb upstream 5.0kb upstream 5000 false Scaffold1283: 10205-15204 Arabidopsis halleri
Araha.1283s0006 5.0kb downstream 5.0kb downstream 6320 true Scaffold1283: 15205-21524 Arabidopsis halleri
Araha.1283s0006 5.0kb downstream 5.0kb downstream 5000 false Scaffold1283: 16525-21524 Arabidopsis halleri
Araha.1283s0006 10.0kb upstream 10.0kb upstream 11320 true Scaffold1283: 5205-16524 Arabidopsis halleri
Araha.1283s0006 10.0kb upstream 10.0kb upstream 10000 false Scaffold1283: 5205-15204 Arabidopsis halleri
Araha.1283s0006 10.0kb downstream 10.0kb downstream 11320 true Scaffold1283: 15205-26524 Arabidopsis halleri
Araha.1283s0006 10.0kb downstream 10.0kb downstream 10000 false Scaffold1283: 16525-26524 Arabidopsis halleri

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121483967 5273 Angiosperm Singleton cluster - no MSA
122317682 5261 Brassicaceae Singleton cluster - no MSA
123759282 5264 Brassicales-Malvales Singleton cluster - no MSA
124257917 5266 SBM Singleton cluster - no MSA
124114540 5268 Malvidae Singleton cluster - no MSA
123843932 5270 Rosid Singleton cluster - no MSA
123430215 5271 Pentapetalae Singleton cluster - no MSA
122465836 5272 Eudicot Singleton cluster - no MSA
120757362 5274 Embryophyte Singleton cluster - no MSA
122799822 5275 Viridiplantae Singleton cluster - no MSA

0 Rna Seq Expressions

0 Strain