Gene : Araha.0097s0004 A. halleri v1.1

Defline:  (1 of 3) KOG2659 - LisH motif-containing protein Genomic Order:  4
Name:  ? Araha.0097s0004 Secondary Identifier:  ? PAC:28848551

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Araha.0097s0004 0.5kb upstream 0.5kb upstream 2371 true Scaffold97: 9160-11530 Arabidopsis halleri
Araha.0097s0004 0.5kb upstream 0.5kb upstream 500 false Scaffold97: 9160-9659 Arabidopsis halleri
Araha.0097s0004 0.5kb downstream 0.5kb downstream 2371 true Scaffold97: 9660-12030 Arabidopsis halleri
Araha.0097s0004 0.5kb downstream 0.5kb downstream 500 false Scaffold97: 11531-12030 Arabidopsis halleri
Araha.0097s0004 1.0kb upstream 1.0kb upstream 2871 true Scaffold97: 8660-11530 Arabidopsis halleri
Araha.0097s0004 1.0kb upstream 1.0kb upstream 1000 false Scaffold97: 8660-9659 Arabidopsis halleri
Araha.0097s0004 1.0kb downstream 1.0kb downstream 2871 true Scaffold97: 9660-12530 Arabidopsis halleri
Araha.0097s0004 1.0kb downstream 1.0kb downstream 1000 false Scaffold97: 11531-12530 Arabidopsis halleri
Araha.0097s0004 2.0kb upstream 2.0kb upstream 3871 true Scaffold97: 7660-11530 Arabidopsis halleri
Araha.0097s0004 2.0kb upstream 2.0kb upstream 2000 false Scaffold97: 7660-9659 Arabidopsis halleri
Araha.0097s0004 2.0kb downstream 2.0kb downstream 3871 true Scaffold97: 9660-13530 Arabidopsis halleri
Araha.0097s0004 2.0kb downstream 2.0kb downstream 2000 false Scaffold97: 11531-13530 Arabidopsis halleri
Araha.0097s0004 5.0kb upstream 5.0kb upstream 6871 true Scaffold97: 4660-11530 Arabidopsis halleri
Araha.0097s0004 5.0kb upstream 5.0kb upstream 5000 false Scaffold97: 4660-9659 Arabidopsis halleri
Araha.0097s0004 5.0kb downstream 5.0kb downstream 6871 true Scaffold97: 9660-16530 Arabidopsis halleri
Araha.0097s0004 5.0kb downstream 5.0kb downstream 5000 false Scaffold97: 11531-16530 Arabidopsis halleri
Araha.0097s0004 10.0kb upstream 10.0kb upstream 11530 true Scaffold97: 1-11530 Arabidopsis halleri
Araha.0097s0004 10.0kb upstream 10.0kb upstream 9659 false Scaffold97: 1-9659 Arabidopsis halleri
Araha.0097s0004 10.0kb downstream 10.0kb downstream 7129 true Scaffold97: 9660-16788 Arabidopsis halleri
Araha.0097s0004 10.0kb downstream 10.0kb downstream 5258 false Scaffold97: 11531-16788 Arabidopsis halleri

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122360181 5261 Brassicaceae View MSA
123833357 5264 Brassicales-Malvales View MSA
124343184 5266 SBM View MSA
124237084 5268 Malvidae View MSA
124061222 5270 Rosid View MSA
123749928 5271 Pentapetalae View MSA
122788874 5272 Eudicot View MSA
122047349 5273 Angiosperm View MSA
121347103 5274 Embryophyte View MSA
123424554 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain