Gene : Araha.33472s0001 A. halleri v1.1

Defline:  (1 of 1) PTHR11206:SF115 - MATE EFFLUX FAMILY PROTEIN Genomic Order:  1
Name:  ? Araha.33472s0001 Secondary Identifier:  ? PAC:28854776

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Araha.33472s0001 0.5kb upstream 0.5kb upstream 4492 true Scaffold33472: 3933-8424 Arabidopsis halleri
Araha.33472s0001 0.5kb upstream 0.5kb upstream 500 false Scaffold33472: 7925-8424 Arabidopsis halleri
Araha.33472s0001 0.5kb downstream 0.5kb downstream 4492 true Scaffold33472: 3433-7924 Arabidopsis halleri
Araha.33472s0001 0.5kb downstream 0.5kb downstream 500 false Scaffold33472: 3433-3932 Arabidopsis halleri
Araha.33472s0001 1.0kb upstream 1.0kb upstream 4992 true Scaffold33472: 3933-8924 Arabidopsis halleri
Araha.33472s0001 1.0kb upstream 1.0kb upstream 1000 false Scaffold33472: 7925-8924 Arabidopsis halleri
Araha.33472s0001 1.0kb downstream 1.0kb downstream 4992 true Scaffold33472: 2933-7924 Arabidopsis halleri
Araha.33472s0001 1.0kb downstream 1.0kb downstream 1000 false Scaffold33472: 2933-3932 Arabidopsis halleri
Araha.33472s0001 2.0kb upstream 2.0kb upstream 5992 true Scaffold33472: 3933-9924 Arabidopsis halleri
Araha.33472s0001 2.0kb upstream 2.0kb upstream 2000 false Scaffold33472: 7925-9924 Arabidopsis halleri
Araha.33472s0001 2.0kb downstream 2.0kb downstream 5992 true Scaffold33472: 1933-7924 Arabidopsis halleri
Araha.33472s0001 2.0kb downstream 2.0kb downstream 2000 false Scaffold33472: 1933-3932 Arabidopsis halleri
Araha.33472s0001 5.0kb upstream 5.0kb upstream 8992 true Scaffold33472: 3933-12924 Arabidopsis halleri
Araha.33472s0001 5.0kb upstream 5.0kb upstream 5000 false Scaffold33472: 7925-12924 Arabidopsis halleri
Araha.33472s0001 5.0kb downstream 5.0kb downstream 7924 true Scaffold33472: 1-7924 Arabidopsis halleri
Araha.33472s0001 5.0kb downstream 5.0kb downstream 3932 false Scaffold33472: 1-3932 Arabidopsis halleri
Araha.33472s0001 10.0kb upstream 10.0kb upstream 9164 true Scaffold33472: 3933-13096 Arabidopsis halleri
Araha.33472s0001 10.0kb upstream 10.0kb upstream 5172 false Scaffold33472: 7925-13096 Arabidopsis halleri
Araha.33472s0001 10.0kb downstream 10.0kb downstream 7924 true Scaffold33472: 1-7924 Arabidopsis halleri
Araha.33472s0001 10.0kb downstream 10.0kb downstream 3932 false Scaffold33472: 1-3932 Arabidopsis halleri

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122368620 5261 Brassicaceae View MSA
123829857 5264 Brassicales-Malvales View MSA
124344993 5266 SBM View MSA
124243778 5268 Malvidae View MSA
124068404 5270 Rosid View MSA
123646707 5271 Pentapetalae View MSA
122792488 5272 Eudicot View MSA
122050809 5273 Angiosperm View MSA
121344541 5274 Embryophyte View MSA
123428088 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain