Gene : Araha.0286s0002 A. halleri v1.1

Defline:  (1 of 3) 4.1.2.53 - 2-keto-3-deoxy-L-rhamnonate aldolase / KDR aldolase Genomic Order:  2
Name:  ? Araha.0286s0002 Secondary Identifier:  ? PAC:28861161

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Araha.0286s0002 0.5kb upstream 0.5kb upstream 920 true Scaffold286: 3016-3935 Arabidopsis halleri
Araha.0286s0002 0.5kb upstream 0.5kb upstream 500 false Scaffold286: 3016-3515 Arabidopsis halleri
Araha.0286s0002 0.5kb downstream 0.5kb downstream 920 true Scaffold286: 3516-4435 Arabidopsis halleri
Araha.0286s0002 0.5kb downstream 0.5kb downstream 500 false Scaffold286: 3936-4435 Arabidopsis halleri
Araha.0286s0002 1.0kb upstream 1.0kb upstream 1420 true Scaffold286: 2516-3935 Arabidopsis halleri
Araha.0286s0002 1.0kb upstream 1.0kb upstream 1000 false Scaffold286: 2516-3515 Arabidopsis halleri
Araha.0286s0002 1.0kb downstream 1.0kb downstream 1420 true Scaffold286: 3516-4935 Arabidopsis halleri
Araha.0286s0002 1.0kb downstream 1.0kb downstream 1000 false Scaffold286: 3936-4935 Arabidopsis halleri
Araha.0286s0002 2.0kb upstream 2.0kb upstream 2420 true Scaffold286: 1516-3935 Arabidopsis halleri
Araha.0286s0002 2.0kb upstream 2.0kb upstream 2000 false Scaffold286: 1516-3515 Arabidopsis halleri
Araha.0286s0002 2.0kb downstream 2.0kb downstream 2420 true Scaffold286: 3516-5935 Arabidopsis halleri
Araha.0286s0002 2.0kb downstream 2.0kb downstream 2000 false Scaffold286: 3936-5935 Arabidopsis halleri
Araha.0286s0002 5.0kb upstream 5.0kb upstream 3935 true Scaffold286: 1-3935 Arabidopsis halleri
Araha.0286s0002 5.0kb upstream 5.0kb upstream 3515 false Scaffold286: 1-3515 Arabidopsis halleri
Araha.0286s0002 5.0kb downstream 5.0kb downstream 3919 true Scaffold286: 3516-7434 Arabidopsis halleri
Araha.0286s0002 5.0kb downstream 5.0kb downstream 3499 false Scaffold286: 3936-7434 Arabidopsis halleri
Araha.0286s0002 10.0kb upstream 10.0kb upstream 3935 true Scaffold286: 1-3935 Arabidopsis halleri
Araha.0286s0002 10.0kb upstream 10.0kb upstream 3515 false Scaffold286: 1-3515 Arabidopsis halleri
Araha.0286s0002 10.0kb downstream 10.0kb downstream 3919 true Scaffold286: 3516-7434 Arabidopsis halleri
Araha.0286s0002 10.0kb downstream 10.0kb downstream 3499 false Scaffold286: 3936-7434 Arabidopsis halleri

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121487975 5273 Angiosperm Singleton cluster - no MSA
122321707 5261 Brassicaceae Singleton cluster - no MSA
123763302 5264 Brassicales-Malvales Singleton cluster - no MSA
124261937 5266 SBM Singleton cluster - no MSA
124118556 5268 Malvidae Singleton cluster - no MSA
123847946 5270 Rosid Singleton cluster - no MSA
123434226 5271 Pentapetalae Singleton cluster - no MSA
122469846 5272 Eudicot Singleton cluster - no MSA
120761364 5274 Embryophyte Singleton cluster - no MSA
122803807 5275 Viridiplantae Singleton cluster - no MSA

0 Rna Seq Expressions

0 Strain