Gene : Araha.0183s0003 A. halleri v1.1

Defline:  (1 of 8) PF07797 - Protein of unknown function (DUF1639) (DUF1639) Genomic Order:  3
Name:  ? Araha.0183s0003 Secondary Identifier:  ? PAC:28861647

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Araha.0183s0003 0.5kb upstream 0.5kb upstream 1582 true Scaffold183: 3881-5462 Arabidopsis halleri
Araha.0183s0003 0.5kb upstream 0.5kb upstream 500 false Scaffold183: 4963-5462 Arabidopsis halleri
Araha.0183s0003 0.5kb downstream 0.5kb downstream 1582 true Scaffold183: 3381-4962 Arabidopsis halleri
Araha.0183s0003 0.5kb downstream 0.5kb downstream 500 false Scaffold183: 3381-3880 Arabidopsis halleri
Araha.0183s0003 1.0kb upstream 1.0kb upstream 2082 true Scaffold183: 3881-5962 Arabidopsis halleri
Araha.0183s0003 1.0kb upstream 1.0kb upstream 1000 false Scaffold183: 4963-5962 Arabidopsis halleri
Araha.0183s0003 1.0kb downstream 1.0kb downstream 2082 true Scaffold183: 2881-4962 Arabidopsis halleri
Araha.0183s0003 1.0kb downstream 1.0kb downstream 1000 false Scaffold183: 2881-3880 Arabidopsis halleri
Araha.0183s0003 2.0kb upstream 2.0kb upstream 3082 true Scaffold183: 3881-6962 Arabidopsis halleri
Araha.0183s0003 2.0kb upstream 2.0kb upstream 2000 false Scaffold183: 4963-6962 Arabidopsis halleri
Araha.0183s0003 2.0kb downstream 2.0kb downstream 3082 true Scaffold183: 1881-4962 Arabidopsis halleri
Araha.0183s0003 2.0kb downstream 2.0kb downstream 2000 false Scaffold183: 1881-3880 Arabidopsis halleri
Araha.0183s0003 5.0kb upstream 5.0kb upstream 6082 true Scaffold183: 3881-9962 Arabidopsis halleri
Araha.0183s0003 5.0kb upstream 5.0kb upstream 5000 false Scaffold183: 4963-9962 Arabidopsis halleri
Araha.0183s0003 5.0kb downstream 5.0kb downstream 4962 true Scaffold183: 1-4962 Arabidopsis halleri
Araha.0183s0003 5.0kb downstream 5.0kb downstream 3880 false Scaffold183: 1-3880 Arabidopsis halleri
Araha.0183s0003 10.0kb upstream 10.0kb upstream 9943 true Scaffold183: 3881-13823 Arabidopsis halleri
Araha.0183s0003 10.0kb upstream 10.0kb upstream 8861 false Scaffold183: 4963-13823 Arabidopsis halleri
Araha.0183s0003 10.0kb downstream 10.0kb downstream 4962 true Scaffold183: 1-4962 Arabidopsis halleri
Araha.0183s0003 10.0kb downstream 10.0kb downstream 3880 false Scaffold183: 1-3880 Arabidopsis halleri

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122380856 5261 Brassicaceae View MSA
123802936 5264 Brassicales-Malvales View MSA
124300086 5266 SBM View MSA
124253644 5268 Malvidae View MSA
124073267 5270 Rosid View MSA
123753733 5271 Pentapetalae View MSA
122792020 5272 Eudicot View MSA
122049023 5273 Angiosperm View MSA
121351496 5274 Embryophyte View MSA
123382191 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain