Gene : Araha.0436s0001 A. halleri v1.1

Defline:  (1 of 9) PF10358 - N-terminal C2 in EEIG1 and EHBP1 proteins (NT-C2) Genomic Order:  1
Name:  ? Araha.0436s0001 Secondary Identifier:  ? PAC:28845660

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Araha.0436s0001 0.5kb upstream 0.5kb upstream 7748 true Scaffold436: 11178-18925 Arabidopsis halleri
Araha.0436s0001 0.5kb upstream 0.5kb upstream 500 false Scaffold436: 11178-11677 Arabidopsis halleri
Araha.0436s0001 0.5kb downstream 0.5kb downstream 7748 true Scaffold436: 11678-19425 Arabidopsis halleri
Araha.0436s0001 0.5kb downstream 0.5kb downstream 500 false Scaffold436: 18926-19425 Arabidopsis halleri
Araha.0436s0001 1.0kb upstream 1.0kb upstream 8248 true Scaffold436: 10678-18925 Arabidopsis halleri
Araha.0436s0001 1.0kb upstream 1.0kb upstream 1000 false Scaffold436: 10678-11677 Arabidopsis halleri
Araha.0436s0001 1.0kb downstream 1.0kb downstream 8248 true Scaffold436: 11678-19925 Arabidopsis halleri
Araha.0436s0001 1.0kb downstream 1.0kb downstream 1000 false Scaffold436: 18926-19925 Arabidopsis halleri
Araha.0436s0001 2.0kb upstream 2.0kb upstream 9248 true Scaffold436: 9678-18925 Arabidopsis halleri
Araha.0436s0001 2.0kb upstream 2.0kb upstream 2000 false Scaffold436: 9678-11677 Arabidopsis halleri
Araha.0436s0001 2.0kb downstream 2.0kb downstream 9248 true Scaffold436: 11678-20925 Arabidopsis halleri
Araha.0436s0001 2.0kb downstream 2.0kb downstream 2000 false Scaffold436: 18926-20925 Arabidopsis halleri
Araha.0436s0001 5.0kb upstream 5.0kb upstream 12248 true Scaffold436: 6678-18925 Arabidopsis halleri
Araha.0436s0001 5.0kb upstream 5.0kb upstream 5000 false Scaffold436: 6678-11677 Arabidopsis halleri
Araha.0436s0001 5.0kb downstream 5.0kb downstream 12248 true Scaffold436: 11678-23925 Arabidopsis halleri
Araha.0436s0001 5.0kb downstream 5.0kb downstream 5000 false Scaffold436: 18926-23925 Arabidopsis halleri
Araha.0436s0001 10.0kb upstream 10.0kb upstream 17248 true Scaffold436: 1678-18925 Arabidopsis halleri
Araha.0436s0001 10.0kb upstream 10.0kb upstream 10000 false Scaffold436: 1678-11677 Arabidopsis halleri
Araha.0436s0001 10.0kb downstream 10.0kb downstream 17248 true Scaffold436: 11678-28925 Arabidopsis halleri
Araha.0436s0001 10.0kb downstream 10.0kb downstream 10000 false Scaffold436: 18926-28925 Arabidopsis halleri

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122366459 5261 Brassicaceae View MSA
123834299 5264 Brassicales-Malvales View MSA
124339610 5266 SBM View MSA
124237779 5268 Malvidae View MSA
124073951 5270 Rosid View MSA
123751263 5271 Pentapetalae View MSA
122794773 5272 Eudicot View MSA
122048313 5273 Angiosperm View MSA
121348283 5274 Embryophyte View MSA
123428094 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain