Gene : Araha.0403s0008 A. halleri v1.1

Defline:  (1 of 4) PTHR31500:SF18 - AT HOOK MOTIF DNA-BINDING FAMILY PROTEIN-RELATED Genomic Order:  8
Name:  ? Araha.0403s0008 Secondary Identifier:  ? PAC:28859146

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Araha.0403s0008 0.5kb upstream 0.5kb upstream 3218 true Scaffold403: 27015-30232 Arabidopsis halleri
Araha.0403s0008 0.5kb upstream 0.5kb upstream 500 false Scaffold403: 29733-30232 Arabidopsis halleri
Araha.0403s0008 0.5kb downstream 0.5kb downstream 3218 true Scaffold403: 26515-29732 Arabidopsis halleri
Araha.0403s0008 0.5kb downstream 0.5kb downstream 500 false Scaffold403: 26515-27014 Arabidopsis halleri
Araha.0403s0008 1.0kb upstream 1.0kb upstream 3718 true Scaffold403: 27015-30732 Arabidopsis halleri
Araha.0403s0008 1.0kb upstream 1.0kb upstream 1000 false Scaffold403: 29733-30732 Arabidopsis halleri
Araha.0403s0008 1.0kb downstream 1.0kb downstream 3718 true Scaffold403: 26015-29732 Arabidopsis halleri
Araha.0403s0008 1.0kb downstream 1.0kb downstream 1000 false Scaffold403: 26015-27014 Arabidopsis halleri
Araha.0403s0008 2.0kb upstream 2.0kb upstream 4718 true Scaffold403: 27015-31732 Arabidopsis halleri
Araha.0403s0008 2.0kb upstream 2.0kb upstream 2000 false Scaffold403: 29733-31732 Arabidopsis halleri
Araha.0403s0008 2.0kb downstream 2.0kb downstream 4718 true Scaffold403: 25015-29732 Arabidopsis halleri
Araha.0403s0008 2.0kb downstream 2.0kb downstream 2000 false Scaffold403: 25015-27014 Arabidopsis halleri
Araha.0403s0008 5.0kb upstream 5.0kb upstream 7718 true Scaffold403: 27015-34732 Arabidopsis halleri
Araha.0403s0008 5.0kb upstream 5.0kb upstream 5000 false Scaffold403: 29733-34732 Arabidopsis halleri
Araha.0403s0008 5.0kb downstream 5.0kb downstream 7718 true Scaffold403: 22015-29732 Arabidopsis halleri
Araha.0403s0008 5.0kb downstream 5.0kb downstream 5000 false Scaffold403: 22015-27014 Arabidopsis halleri
Araha.0403s0008 10.0kb upstream 10.0kb upstream 12718 true Scaffold403: 27015-39732 Arabidopsis halleri
Araha.0403s0008 10.0kb upstream 10.0kb upstream 10000 false Scaffold403: 29733-39732 Arabidopsis halleri
Araha.0403s0008 10.0kb downstream 10.0kb downstream 12718 true Scaffold403: 17015-29732 Arabidopsis halleri
Araha.0403s0008 10.0kb downstream 10.0kb downstream 10000 false Scaffold403: 17015-27014 Arabidopsis halleri

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122368379 5261 Brassicaceae View MSA
123799558 5264 Brassicales-Malvales View MSA
124297068 5266 SBM View MSA
124251241 5268 Malvidae View MSA
124071035 5270 Rosid View MSA
123753724 5271 Pentapetalae View MSA
122796118 5272 Eudicot View MSA
122049850 5273 Angiosperm View MSA
121348420 5274 Embryophyte View MSA
123380859 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain