Gene : Araha.0368s0014 A. halleri v1.1
Defline:  (1 of 3) PTHR12741:SF9 - CALLOSE SYNTHASE 1-RELATED Genomic Order:  14
Name:  ? Araha.0368s0014 Secondary Identifier:  ? PAC:28854366
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Ahalleri PWY-6773 Arabidopsis halleri pathologic  

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Araha.0368s0014 0.5kb upstream 0.5kb upstream 12056 true Scaffold368: 47086-59141 Arabidopsis halleri
Araha.0368s0014 0.5kb upstream 0.5kb upstream 500 false Scaffold368: 47086-47585 Arabidopsis halleri
Araha.0368s0014 0.5kb downstream 0.5kb downstream 12056 true Scaffold368: 47586-59641 Arabidopsis halleri
Araha.0368s0014 0.5kb downstream 0.5kb downstream 500 false Scaffold368: 59142-59641 Arabidopsis halleri
Araha.0368s0014 1.0kb upstream 1.0kb upstream 12556 true Scaffold368: 46586-59141 Arabidopsis halleri
Araha.0368s0014 1.0kb upstream 1.0kb upstream 1000 false Scaffold368: 46586-47585 Arabidopsis halleri
Araha.0368s0014 1.0kb downstream 1.0kb downstream 12556 true Scaffold368: 47586-60141 Arabidopsis halleri
Araha.0368s0014 1.0kb downstream 1.0kb downstream 1000 false Scaffold368: 59142-60141 Arabidopsis halleri
Araha.0368s0014 2.0kb upstream 2.0kb upstream 13556 true Scaffold368: 45586-59141 Arabidopsis halleri
Araha.0368s0014 2.0kb upstream 2.0kb upstream 2000 false Scaffold368: 45586-47585 Arabidopsis halleri
Araha.0368s0014 2.0kb downstream 2.0kb downstream 13556 true Scaffold368: 47586-61141 Arabidopsis halleri
Araha.0368s0014 2.0kb downstream 2.0kb downstream 2000 false Scaffold368: 59142-61141 Arabidopsis halleri
Araha.0368s0014 5.0kb upstream 5.0kb upstream 16556 true Scaffold368: 42586-59141 Arabidopsis halleri
Araha.0368s0014 5.0kb upstream 5.0kb upstream 5000 false Scaffold368: 42586-47585 Arabidopsis halleri
Araha.0368s0014 5.0kb downstream 5.0kb downstream 14276 true Scaffold368: 47586-61861 Arabidopsis halleri
Araha.0368s0014 5.0kb downstream 5.0kb downstream 2720 false Scaffold368: 59142-61861 Arabidopsis halleri
Araha.0368s0014 10.0kb upstream 10.0kb upstream 21556 true Scaffold368: 37586-59141 Arabidopsis halleri
Araha.0368s0014 10.0kb upstream 10.0kb upstream 10000 false Scaffold368: 37586-47585 Arabidopsis halleri
Araha.0368s0014 10.0kb downstream 10.0kb downstream 14276 true Scaffold368: 47586-61861 Arabidopsis halleri
Araha.0368s0014 10.0kb downstream 10.0kb downstream 2720 false Scaffold368: 59142-61861 Arabidopsis halleri

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122364153 5261 Brassicaceae View MSA
123798695 5264 Brassicales-Malvales View MSA
124346959 5266 SBM View MSA
124251802 5268 Malvidae View MSA
124072639 5270 Rosid View MSA
123745171 5271 Pentapetalae View MSA
122788947 5272 Eudicot View MSA
122050431 5273 Angiosperm View MSA
121349066 5274 Embryophyte View MSA
123428420 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain