Gene : Araha.0323s0003 A. halleri v1.1

Defline:  (1 of 3) PTHR24326:SF264 - HOMEOBOX-LEUCINE ZIPPER PROTEIN ATHB-20-RELATED Genomic Order:  3
Name:  ? Araha.0323s0003 Secondary Identifier:  ? PAC:28857063

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Araha.0323s0003 0.5kb upstream 0.5kb upstream 2624 true Scaffold323: 12337-14960 Arabidopsis halleri
Araha.0323s0003 0.5kb upstream 0.5kb upstream 500 false Scaffold323: 14461-14960 Arabidopsis halleri
Araha.0323s0003 0.5kb downstream 0.5kb downstream 2624 true Scaffold323: 11837-14460 Arabidopsis halleri
Araha.0323s0003 0.5kb downstream 0.5kb downstream 500 false Scaffold323: 11837-12336 Arabidopsis halleri
Araha.0323s0003 1.0kb upstream 1.0kb upstream 3124 true Scaffold323: 12337-15460 Arabidopsis halleri
Araha.0323s0003 1.0kb upstream 1.0kb upstream 1000 false Scaffold323: 14461-15460 Arabidopsis halleri
Araha.0323s0003 1.0kb downstream 1.0kb downstream 3124 true Scaffold323: 11337-14460 Arabidopsis halleri
Araha.0323s0003 1.0kb downstream 1.0kb downstream 1000 false Scaffold323: 11337-12336 Arabidopsis halleri
Araha.0323s0003 2.0kb upstream 2.0kb upstream 4124 true Scaffold323: 12337-16460 Arabidopsis halleri
Araha.0323s0003 2.0kb upstream 2.0kb upstream 2000 false Scaffold323: 14461-16460 Arabidopsis halleri
Araha.0323s0003 2.0kb downstream 2.0kb downstream 4124 true Scaffold323: 10337-14460 Arabidopsis halleri
Araha.0323s0003 2.0kb downstream 2.0kb downstream 2000 false Scaffold323: 10337-12336 Arabidopsis halleri
Araha.0323s0003 5.0kb upstream 5.0kb upstream 7124 true Scaffold323: 12337-19460 Arabidopsis halleri
Araha.0323s0003 5.0kb upstream 5.0kb upstream 5000 false Scaffold323: 14461-19460 Arabidopsis halleri
Araha.0323s0003 5.0kb downstream 5.0kb downstream 7124 true Scaffold323: 7337-14460 Arabidopsis halleri
Araha.0323s0003 5.0kb downstream 5.0kb downstream 5000 false Scaffold323: 7337-12336 Arabidopsis halleri
Araha.0323s0003 10.0kb upstream 10.0kb upstream 12124 true Scaffold323: 12337-24460 Arabidopsis halleri
Araha.0323s0003 10.0kb upstream 10.0kb upstream 10000 false Scaffold323: 14461-24460 Arabidopsis halleri
Araha.0323s0003 10.0kb downstream 10.0kb downstream 12124 true Scaffold323: 2337-14460 Arabidopsis halleri
Araha.0323s0003 10.0kb downstream 10.0kb downstream 10000 false Scaffold323: 2337-12336 Arabidopsis halleri

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122376493 5261 Brassicaceae View MSA
123837312 5264 Brassicales-Malvales View MSA
124343969 5266 SBM View MSA
124251530 5268 Malvidae View MSA
124071731 5270 Rosid View MSA
123747120 5271 Pentapetalae View MSA
122786437 5272 Eudicot View MSA
122042617 5273 Angiosperm View MSA
121351579 5274 Embryophyte View MSA
123382235 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain