Gene : Araha.0354s0003 A. halleri v1.1
Defline:  (1 of 1) PTHR23315:SF52 - U-BOX DOMAIN-CONTAINING PROTEIN 10-RELATED Genomic Order:  3
Name:  ? Araha.0354s0003 Secondary Identifier:  ? PAC:28859776
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Ahalleri PWY-7511 Arabidopsis halleri pathologic  

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Araha.0354s0003 0.5kb upstream 0.5kb upstream 3087 true Scaffold354: 24371-27457 Arabidopsis halleri
Araha.0354s0003 0.5kb upstream 0.5kb upstream 500 false Scaffold354: 26958-27457 Arabidopsis halleri
Araha.0354s0003 0.5kb downstream 0.5kb downstream 3087 true Scaffold354: 23871-26957 Arabidopsis halleri
Araha.0354s0003 0.5kb downstream 0.5kb downstream 500 false Scaffold354: 23871-24370 Arabidopsis halleri
Araha.0354s0003 1.0kb upstream 1.0kb upstream 3587 true Scaffold354: 24371-27957 Arabidopsis halleri
Araha.0354s0003 1.0kb upstream 1.0kb upstream 1000 false Scaffold354: 26958-27957 Arabidopsis halleri
Araha.0354s0003 1.0kb downstream 1.0kb downstream 3587 true Scaffold354: 23371-26957 Arabidopsis halleri
Araha.0354s0003 1.0kb downstream 1.0kb downstream 1000 false Scaffold354: 23371-24370 Arabidopsis halleri
Araha.0354s0003 2.0kb upstream 2.0kb upstream 4587 true Scaffold354: 24371-28957 Arabidopsis halleri
Araha.0354s0003 2.0kb upstream 2.0kb upstream 2000 false Scaffold354: 26958-28957 Arabidopsis halleri
Araha.0354s0003 2.0kb downstream 2.0kb downstream 4587 true Scaffold354: 22371-26957 Arabidopsis halleri
Araha.0354s0003 2.0kb downstream 2.0kb downstream 2000 false Scaffold354: 22371-24370 Arabidopsis halleri
Araha.0354s0003 5.0kb upstream 5.0kb upstream 7587 true Scaffold354: 24371-31957 Arabidopsis halleri
Araha.0354s0003 5.0kb upstream 5.0kb upstream 5000 false Scaffold354: 26958-31957 Arabidopsis halleri
Araha.0354s0003 5.0kb downstream 5.0kb downstream 7587 true Scaffold354: 19371-26957 Arabidopsis halleri
Araha.0354s0003 5.0kb downstream 5.0kb downstream 5000 false Scaffold354: 19371-24370 Arabidopsis halleri
Araha.0354s0003 10.0kb upstream 10.0kb upstream 12587 true Scaffold354: 24371-36957 Arabidopsis halleri
Araha.0354s0003 10.0kb upstream 10.0kb upstream 10000 false Scaffold354: 26958-36957 Arabidopsis halleri
Araha.0354s0003 10.0kb downstream 10.0kb downstream 12587 true Scaffold354: 14371-26957 Arabidopsis halleri
Araha.0354s0003 10.0kb downstream 10.0kb downstream 10000 false Scaffold354: 14371-24370 Arabidopsis halleri

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122371158 5261 Brassicaceae View MSA
123835937 5264 Brassicales-Malvales View MSA
124339411 5266 SBM View MSA
124237538 5268 Malvidae View MSA
124062819 5270 Rosid View MSA
123743592 5271 Pentapetalae View MSA
122789387 5272 Eudicot View MSA
122050659 5273 Angiosperm View MSA
121312051 5274 Embryophyte View MSA
123428864 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain