Gene : Araha.0625s0006 A. halleri v1.1

Defline:  (1 of 1) PF13041//PF14531 - PPR repeat family (PPR_2) // Kinase-like (Kinase-like) Genomic Order:  6
Name:  ? Araha.0625s0006 Secondary Identifier:  ? PAC:28853499

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Araha.0625s0006 0.5kb upstream 0.5kb upstream 5286 true Scaffold625: 24420-29705 Arabidopsis halleri
Araha.0625s0006 0.5kb upstream 0.5kb upstream 500 false Scaffold625: 29206-29705 Arabidopsis halleri
Araha.0625s0006 0.5kb downstream 0.5kb downstream 5286 true Scaffold625: 23920-29205 Arabidopsis halleri
Araha.0625s0006 0.5kb downstream 0.5kb downstream 500 false Scaffold625: 23920-24419 Arabidopsis halleri
Araha.0625s0006 1.0kb upstream 1.0kb upstream 5786 true Scaffold625: 24420-30205 Arabidopsis halleri
Araha.0625s0006 1.0kb upstream 1.0kb upstream 1000 false Scaffold625: 29206-30205 Arabidopsis halleri
Araha.0625s0006 1.0kb downstream 1.0kb downstream 5786 true Scaffold625: 23420-29205 Arabidopsis halleri
Araha.0625s0006 1.0kb downstream 1.0kb downstream 1000 false Scaffold625: 23420-24419 Arabidopsis halleri
Araha.0625s0006 2.0kb upstream 2.0kb upstream 6786 true Scaffold625: 24420-31205 Arabidopsis halleri
Araha.0625s0006 2.0kb upstream 2.0kb upstream 2000 false Scaffold625: 29206-31205 Arabidopsis halleri
Araha.0625s0006 2.0kb downstream 2.0kb downstream 6786 true Scaffold625: 22420-29205 Arabidopsis halleri
Araha.0625s0006 2.0kb downstream 2.0kb downstream 2000 false Scaffold625: 22420-24419 Arabidopsis halleri
Araha.0625s0006 5.0kb upstream 5.0kb upstream 7856 true Scaffold625: 24420-32275 Arabidopsis halleri
Araha.0625s0006 5.0kb upstream 5.0kb upstream 3070 false Scaffold625: 29206-32275 Arabidopsis halleri
Araha.0625s0006 5.0kb downstream 5.0kb downstream 9786 true Scaffold625: 19420-29205 Arabidopsis halleri
Araha.0625s0006 5.0kb downstream 5.0kb downstream 5000 false Scaffold625: 19420-24419 Arabidopsis halleri
Araha.0625s0006 10.0kb upstream 10.0kb upstream 7856 true Scaffold625: 24420-32275 Arabidopsis halleri
Araha.0625s0006 10.0kb upstream 10.0kb upstream 3070 false Scaffold625: 29206-32275 Arabidopsis halleri
Araha.0625s0006 10.0kb downstream 10.0kb downstream 14786 true Scaffold625: 14420-29205 Arabidopsis halleri
Araha.0625s0006 10.0kb downstream 10.0kb downstream 10000 false Scaffold625: 14420-24419 Arabidopsis halleri

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122370923 5261 Brassicaceae View MSA
123800069 5264 Brassicales-Malvales View MSA
124297523 5266 SBM View MSA
124149385 5268 Malvidae View MSA
124068377 5270 Rosid View MSA
123740904 5271 Pentapetalae View MSA
122792005 5272 Eudicot View MSA
122042457 5273 Angiosperm View MSA
121344277 5274 Embryophyte View MSA
123380015 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain