Gene : Araha.0626s0002 A. halleri v1.1

Defline:  (1 of 3) PTHR31636:SF38 - SCARECROW-LIKE PROTEIN 21-RELATED Genomic Order:  2
Name:  ? Araha.0626s0002 Secondary Identifier:  ? PAC:28845483

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Araha.0626s0002 0.5kb upstream 0.5kb upstream 2839 true Scaffold626: 804-3642 Arabidopsis halleri
Araha.0626s0002 0.5kb upstream 0.5kb upstream 500 false Scaffold626: 804-1303 Arabidopsis halleri
Araha.0626s0002 0.5kb downstream 0.5kb downstream 2839 true Scaffold626: 1304-4142 Arabidopsis halleri
Araha.0626s0002 0.5kb downstream 0.5kb downstream 500 false Scaffold626: 3643-4142 Arabidopsis halleri
Araha.0626s0002 1.0kb upstream 1.0kb upstream 3339 true Scaffold626: 304-3642 Arabidopsis halleri
Araha.0626s0002 1.0kb upstream 1.0kb upstream 1000 false Scaffold626: 304-1303 Arabidopsis halleri
Araha.0626s0002 1.0kb downstream 1.0kb downstream 3339 true Scaffold626: 1304-4642 Arabidopsis halleri
Araha.0626s0002 1.0kb downstream 1.0kb downstream 1000 false Scaffold626: 3643-4642 Arabidopsis halleri
Araha.0626s0002 2.0kb upstream 2.0kb upstream 3642 true Scaffold626: 1-3642 Arabidopsis halleri
Araha.0626s0002 2.0kb upstream 2.0kb upstream 1303 false Scaffold626: 1-1303 Arabidopsis halleri
Araha.0626s0002 2.0kb downstream 2.0kb downstream 4339 true Scaffold626: 1304-5642 Arabidopsis halleri
Araha.0626s0002 2.0kb downstream 2.0kb downstream 2000 false Scaffold626: 3643-5642 Arabidopsis halleri
Araha.0626s0002 5.0kb upstream 5.0kb upstream 3642 true Scaffold626: 1-3642 Arabidopsis halleri
Araha.0626s0002 5.0kb upstream 5.0kb upstream 1303 false Scaffold626: 1-1303 Arabidopsis halleri
Araha.0626s0002 5.0kb downstream 5.0kb downstream 7339 true Scaffold626: 1304-8642 Arabidopsis halleri
Araha.0626s0002 5.0kb downstream 5.0kb downstream 5000 false Scaffold626: 3643-8642 Arabidopsis halleri
Araha.0626s0002 10.0kb upstream 10.0kb upstream 3642 true Scaffold626: 1-3642 Arabidopsis halleri
Araha.0626s0002 10.0kb upstream 10.0kb upstream 1303 false Scaffold626: 1-1303 Arabidopsis halleri
Araha.0626s0002 10.0kb downstream 10.0kb downstream 12339 true Scaffold626: 1304-13642 Arabidopsis halleri
Araha.0626s0002 10.0kb downstream 10.0kb downstream 10000 false Scaffold626: 3643-13642 Arabidopsis halleri

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122372024 5261 Brassicaceae View MSA
123836526 5264 Brassicales-Malvales View MSA
124338887 5266 SBM View MSA
124244603 5268 Malvidae View MSA
124073750 5270 Rosid View MSA
123752771 5271 Pentapetalae View MSA
122794202 5272 Eudicot View MSA
122051595 5273 Angiosperm View MSA
121350442 5274 Embryophyte View MSA
123381734 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain