Gene : Araha.0632s0009 A. halleri v1.1

Defline:  (1 of 8) KOG0552 - FKBP-type peptidyl-prolyl cis-trans isomerase Genomic Order:  9
Name:  ? Araha.0632s0009 Secondary Identifier:  ? PAC:28853610

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Araha.0632s0009 0.5kb upstream 0.5kb upstream 3600 true Scaffold632: 27920-31519 Arabidopsis halleri
Araha.0632s0009 0.5kb upstream 0.5kb upstream 500 false Scaffold632: 27920-28419 Arabidopsis halleri
Araha.0632s0009 0.5kb downstream 0.5kb downstream 3600 true Scaffold632: 28420-32019 Arabidopsis halleri
Araha.0632s0009 0.5kb downstream 0.5kb downstream 500 false Scaffold632: 31520-32019 Arabidopsis halleri
Araha.0632s0009 1.0kb upstream 1.0kb upstream 4100 true Scaffold632: 27420-31519 Arabidopsis halleri
Araha.0632s0009 1.0kb upstream 1.0kb upstream 1000 false Scaffold632: 27420-28419 Arabidopsis halleri
Araha.0632s0009 1.0kb downstream 1.0kb downstream 4100 true Scaffold632: 28420-32519 Arabidopsis halleri
Araha.0632s0009 1.0kb downstream 1.0kb downstream 1000 false Scaffold632: 31520-32519 Arabidopsis halleri
Araha.0632s0009 2.0kb upstream 2.0kb upstream 5100 true Scaffold632: 26420-31519 Arabidopsis halleri
Araha.0632s0009 2.0kb upstream 2.0kb upstream 2000 false Scaffold632: 26420-28419 Arabidopsis halleri
Araha.0632s0009 2.0kb downstream 2.0kb downstream 5100 true Scaffold632: 28420-33519 Arabidopsis halleri
Araha.0632s0009 2.0kb downstream 2.0kb downstream 2000 false Scaffold632: 31520-33519 Arabidopsis halleri
Araha.0632s0009 5.0kb upstream 5.0kb upstream 8100 true Scaffold632: 23420-31519 Arabidopsis halleri
Araha.0632s0009 5.0kb upstream 5.0kb upstream 5000 false Scaffold632: 23420-28419 Arabidopsis halleri
Araha.0632s0009 5.0kb downstream 5.0kb downstream 8100 true Scaffold632: 28420-36519 Arabidopsis halleri
Araha.0632s0009 5.0kb downstream 5.0kb downstream 5000 false Scaffold632: 31520-36519 Arabidopsis halleri
Araha.0632s0009 10.0kb upstream 10.0kb upstream 13100 true Scaffold632: 18420-31519 Arabidopsis halleri
Araha.0632s0009 10.0kb upstream 10.0kb upstream 10000 false Scaffold632: 18420-28419 Arabidopsis halleri
Araha.0632s0009 10.0kb downstream 10.0kb downstream 13100 true Scaffold632: 28420-41519 Arabidopsis halleri
Araha.0632s0009 10.0kb downstream 10.0kb downstream 10000 false Scaffold632: 31520-41519 Arabidopsis halleri

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122377087 5261 Brassicaceae View MSA
123832128 5264 Brassicales-Malvales View MSA
124346402 5266 SBM View MSA
124239451 5268 Malvidae View MSA
124063880 5270 Rosid View MSA
123749293 5271 Pentapetalae View MSA
122796238 5272 Eudicot View MSA
122047643 5273 Angiosperm View MSA
123428998 5275 Viridiplantae View MSA
121346019 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain