Gene : Araha.0568s0005 A. halleri v1.1

Defline:  (1 of 4) PTHR10826:SF4 - GLYCOPROTEIN FAMILY PROTEIN Genomic Order:  5
Name:  ? Araha.0568s0005 Secondary Identifier:  ? PAC:28845762

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Araha.0568s0005 0.5kb upstream 0.5kb upstream 1421 true Scaffold568: 18530-19950 Arabidopsis halleri
Araha.0568s0005 0.5kb upstream 0.5kb upstream 500 false Scaffold568: 18530-19029 Arabidopsis halleri
Araha.0568s0005 0.5kb downstream 0.5kb downstream 1421 true Scaffold568: 19030-20450 Arabidopsis halleri
Araha.0568s0005 0.5kb downstream 0.5kb downstream 500 false Scaffold568: 19951-20450 Arabidopsis halleri
Araha.0568s0005 1.0kb upstream 1.0kb upstream 1921 true Scaffold568: 18030-19950 Arabidopsis halleri
Araha.0568s0005 1.0kb upstream 1.0kb upstream 1000 false Scaffold568: 18030-19029 Arabidopsis halleri
Araha.0568s0005 1.0kb downstream 1.0kb downstream 1921 true Scaffold568: 19030-20950 Arabidopsis halleri
Araha.0568s0005 1.0kb downstream 1.0kb downstream 1000 false Scaffold568: 19951-20950 Arabidopsis halleri
Araha.0568s0005 2.0kb upstream 2.0kb upstream 2921 true Scaffold568: 17030-19950 Arabidopsis halleri
Araha.0568s0005 2.0kb upstream 2.0kb upstream 2000 false Scaffold568: 17030-19029 Arabidopsis halleri
Araha.0568s0005 2.0kb downstream 2.0kb downstream 2921 true Scaffold568: 19030-21950 Arabidopsis halleri
Araha.0568s0005 2.0kb downstream 2.0kb downstream 2000 false Scaffold568: 19951-21950 Arabidopsis halleri
Araha.0568s0005 5.0kb upstream 5.0kb upstream 5921 true Scaffold568: 14030-19950 Arabidopsis halleri
Araha.0568s0005 5.0kb upstream 5.0kb upstream 5000 false Scaffold568: 14030-19029 Arabidopsis halleri
Araha.0568s0005 5.0kb downstream 5.0kb downstream 5921 true Scaffold568: 19030-24950 Arabidopsis halleri
Araha.0568s0005 5.0kb downstream 5.0kb downstream 5000 false Scaffold568: 19951-24950 Arabidopsis halleri
Araha.0568s0005 10.0kb upstream 10.0kb upstream 10921 true Scaffold568: 9030-19950 Arabidopsis halleri
Araha.0568s0005 10.0kb upstream 10.0kb upstream 10000 false Scaffold568: 9030-19029 Arabidopsis halleri
Araha.0568s0005 10.0kb downstream 10.0kb downstream 10921 true Scaffold568: 19030-29950 Arabidopsis halleri
Araha.0568s0005 10.0kb downstream 10.0kb downstream 10000 false Scaffold568: 19951-29950 Arabidopsis halleri

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122371259 5261 Brassicaceae View MSA
123839135 5264 Brassicales-Malvales View MSA
124344298 5266 SBM View MSA
124237889 5268 Malvidae View MSA
124063426 5270 Rosid View MSA
123740355 5271 Pentapetalae View MSA
122797199 5272 Eudicot View MSA
122041854 5273 Angiosperm View MSA
121348815 5274 Embryophyte View MSA
123426635 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain