Gene : Araha.0572s0005 A. halleri v1.1
Defline:  (1 of 1) PTHR31423:SF3 - PROLYL-TRNA SYNTHETASE ASSOCIATED DOMAIN-CONTAINING PROTEIN 1-RELATED Genomic Order:  5
Name:  ? Araha.0572s0005 Secondary Identifier:  ? PAC:28853453
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Ahalleri TRNA-CHARGING-PWY Arabidopsis halleri pathologic  

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Araha.0572s0005 0.5kb upstream 0.5kb upstream 2510 true Scaffold572: 37911-40420 Arabidopsis halleri
Araha.0572s0005 0.5kb upstream 0.5kb upstream 500 false Scaffold572: 37911-38410 Arabidopsis halleri
Araha.0572s0005 0.5kb downstream 0.5kb downstream 2510 true Scaffold572: 38411-40920 Arabidopsis halleri
Araha.0572s0005 0.5kb downstream 0.5kb downstream 500 false Scaffold572: 40421-40920 Arabidopsis halleri
Araha.0572s0005 1.0kb upstream 1.0kb upstream 3010 true Scaffold572: 37411-40420 Arabidopsis halleri
Araha.0572s0005 1.0kb upstream 1.0kb upstream 1000 false Scaffold572: 37411-38410 Arabidopsis halleri
Araha.0572s0005 1.0kb downstream 1.0kb downstream 3010 true Scaffold572: 38411-41420 Arabidopsis halleri
Araha.0572s0005 1.0kb downstream 1.0kb downstream 1000 false Scaffold572: 40421-41420 Arabidopsis halleri
Araha.0572s0005 2.0kb upstream 2.0kb upstream 4010 true Scaffold572: 36411-40420 Arabidopsis halleri
Araha.0572s0005 2.0kb upstream 2.0kb upstream 2000 false Scaffold572: 36411-38410 Arabidopsis halleri
Araha.0572s0005 2.0kb downstream 2.0kb downstream 4010 true Scaffold572: 38411-42420 Arabidopsis halleri
Araha.0572s0005 2.0kb downstream 2.0kb downstream 2000 false Scaffold572: 40421-42420 Arabidopsis halleri
Araha.0572s0005 5.0kb upstream 5.0kb upstream 7010 true Scaffold572: 33411-40420 Arabidopsis halleri
Araha.0572s0005 5.0kb upstream 5.0kb upstream 5000 false Scaffold572: 33411-38410 Arabidopsis halleri
Araha.0572s0005 5.0kb downstream 5.0kb downstream 7010 true Scaffold572: 38411-45420 Arabidopsis halleri
Araha.0572s0005 5.0kb downstream 5.0kb downstream 5000 false Scaffold572: 40421-45420 Arabidopsis halleri
Araha.0572s0005 10.0kb upstream 10.0kb upstream 12010 true Scaffold572: 28411-40420 Arabidopsis halleri
Araha.0572s0005 10.0kb upstream 10.0kb upstream 10000 false Scaffold572: 28411-38410 Arabidopsis halleri
Araha.0572s0005 10.0kb downstream 10.0kb downstream 9936 true Scaffold572: 38411-48346 Arabidopsis halleri
Araha.0572s0005 10.0kb downstream 10.0kb downstream 7926 false Scaffold572: 40421-48346 Arabidopsis halleri

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122367335 5261 Brassicaceae View MSA
123836180 5264 Brassicales-Malvales View MSA
124337596 5266 SBM View MSA
124237844 5268 Malvidae View MSA
124062922 5270 Rosid View MSA
123736377 5271 Pentapetalae View MSA
122789736 5272 Eudicot View MSA
122045268 5273 Angiosperm View MSA
121348045 5274 Embryophyte View MSA
123425543 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain