Gene : Araha.0579s0002 A. halleri v1.1
Defline:  (1 of 1) PTHR10742:SF284 - LYSINE-SPECIFIC HISTONE DEMETHYLASE 1A Genomic Order:  2
Name:  ? Araha.0579s0002 Secondary Identifier:  ? PAC:28859982
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Ahalleri PWY-6441 Arabidopsis halleri pathologic  

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Araha.0579s0002 0.5kb upstream 0.5kb upstream 8493 true Scaffold579: 3944-12436 Arabidopsis halleri
Araha.0579s0002 0.5kb upstream 0.5kb upstream 500 false Scaffold579: 3944-4443 Arabidopsis halleri
Araha.0579s0002 0.5kb downstream 0.5kb downstream 8493 true Scaffold579: 4444-12936 Arabidopsis halleri
Araha.0579s0002 0.5kb downstream 0.5kb downstream 500 false Scaffold579: 12437-12936 Arabidopsis halleri
Araha.0579s0002 1.0kb upstream 1.0kb upstream 8993 true Scaffold579: 3444-12436 Arabidopsis halleri
Araha.0579s0002 1.0kb upstream 1.0kb upstream 1000 false Scaffold579: 3444-4443 Arabidopsis halleri
Araha.0579s0002 1.0kb downstream 1.0kb downstream 8993 true Scaffold579: 4444-13436 Arabidopsis halleri
Araha.0579s0002 1.0kb downstream 1.0kb downstream 1000 false Scaffold579: 12437-13436 Arabidopsis halleri
Araha.0579s0002 2.0kb upstream 2.0kb upstream 9993 true Scaffold579: 2444-12436 Arabidopsis halleri
Araha.0579s0002 2.0kb upstream 2.0kb upstream 2000 false Scaffold579: 2444-4443 Arabidopsis halleri
Araha.0579s0002 2.0kb downstream 2.0kb downstream 9993 true Scaffold579: 4444-14436 Arabidopsis halleri
Araha.0579s0002 2.0kb downstream 2.0kb downstream 2000 false Scaffold579: 12437-14436 Arabidopsis halleri
Araha.0579s0002 5.0kb upstream 5.0kb upstream 12436 true Scaffold579: 1-12436 Arabidopsis halleri
Araha.0579s0002 5.0kb upstream 5.0kb upstream 4443 false Scaffold579: 1-4443 Arabidopsis halleri
Araha.0579s0002 5.0kb downstream 5.0kb downstream 12993 true Scaffold579: 4444-17436 Arabidopsis halleri
Araha.0579s0002 5.0kb downstream 5.0kb downstream 5000 false Scaffold579: 12437-17436 Arabidopsis halleri
Araha.0579s0002 10.0kb upstream 10.0kb upstream 12436 true Scaffold579: 1-12436 Arabidopsis halleri
Araha.0579s0002 10.0kb upstream 10.0kb upstream 4443 false Scaffold579: 1-4443 Arabidopsis halleri
Araha.0579s0002 10.0kb downstream 10.0kb downstream 17993 true Scaffold579: 4444-22436 Arabidopsis halleri
Araha.0579s0002 10.0kb downstream 10.0kb downstream 10000 false Scaffold579: 12437-22436 Arabidopsis halleri

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122369100 5261 Brassicaceae View MSA
123827782 5264 Brassicales-Malvales View MSA
124338849 5266 SBM View MSA
124238946 5268 Malvidae View MSA
124062670 5270 Rosid View MSA
123738203 5271 Pentapetalae View MSA
122790962 5272 Eudicot View MSA
122046463 5273 Angiosperm View MSA
121349079 5274 Embryophyte View MSA
123428250 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain