Gene : Araha.0602s0001 A. halleri v1.1
Defline:  (1 of 4) PTHR26312:SF76 - TETRATRICOPEPTIDE REPEAT DOMAIN-CONTAINING PROTEIN Genomic Order:  1
Name:  ? Araha.0602s0001 Secondary Identifier:  ? PAC:28839956
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Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Ahalleri PWY-7437 Arabidopsis halleri pathologic  

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Araha.0602s0001 0.5kb upstream 0.5kb upstream 1885 true Scaffold602: 5166-7050 Arabidopsis halleri
Araha.0602s0001 0.5kb upstream 0.5kb upstream 500 false Scaffold602: 6551-7050 Arabidopsis halleri
Araha.0602s0001 0.5kb downstream 0.5kb downstream 1885 true Scaffold602: 4666-6550 Arabidopsis halleri
Araha.0602s0001 0.5kb downstream 0.5kb downstream 500 false Scaffold602: 4666-5165 Arabidopsis halleri
Araha.0602s0001 1.0kb upstream 1.0kb upstream 2385 true Scaffold602: 5166-7550 Arabidopsis halleri
Araha.0602s0001 1.0kb upstream 1.0kb upstream 1000 false Scaffold602: 6551-7550 Arabidopsis halleri
Araha.0602s0001 1.0kb downstream 1.0kb downstream 2385 true Scaffold602: 4166-6550 Arabidopsis halleri
Araha.0602s0001 1.0kb downstream 1.0kb downstream 1000 false Scaffold602: 4166-5165 Arabidopsis halleri
Araha.0602s0001 2.0kb upstream 2.0kb upstream 3385 true Scaffold602: 5166-8550 Arabidopsis halleri
Araha.0602s0001 2.0kb upstream 2.0kb upstream 2000 false Scaffold602: 6551-8550 Arabidopsis halleri
Araha.0602s0001 2.0kb downstream 2.0kb downstream 3385 true Scaffold602: 3166-6550 Arabidopsis halleri
Araha.0602s0001 2.0kb downstream 2.0kb downstream 2000 false Scaffold602: 3166-5165 Arabidopsis halleri
Araha.0602s0001 5.0kb upstream 5.0kb upstream 6385 true Scaffold602: 5166-11550 Arabidopsis halleri
Araha.0602s0001 5.0kb upstream 5.0kb upstream 5000 false Scaffold602: 6551-11550 Arabidopsis halleri
Araha.0602s0001 5.0kb downstream 5.0kb downstream 6385 true Scaffold602: 166-6550 Arabidopsis halleri
Araha.0602s0001 5.0kb downstream 5.0kb downstream 5000 false Scaffold602: 166-5165 Arabidopsis halleri
Araha.0602s0001 10.0kb upstream 10.0kb upstream 11385 true Scaffold602: 5166-16550 Arabidopsis halleri
Araha.0602s0001 10.0kb upstream 10.0kb upstream 10000 false Scaffold602: 6551-16550 Arabidopsis halleri
Araha.0602s0001 10.0kb downstream 10.0kb downstream 6550 true Scaffold602: 1-6550 Arabidopsis halleri
Araha.0602s0001 10.0kb downstream 10.0kb downstream 5165 false Scaffold602: 1-5165 Arabidopsis halleri

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122370983 5261 Brassicaceae View MSA
123840752 5264 Brassicales-Malvales View MSA
124338803 5266 SBM View MSA
124237294 5268 Malvidae View MSA
124062008 5270 Rosid View MSA
123737830 5271 Pentapetalae View MSA
122791127 5272 Eudicot View MSA
122050724 5273 Angiosperm View MSA
121348352 5274 Embryophyte View MSA
123426406 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain