Gene : Araha.0550s0038 A. halleri v1.1
Defline:  (1 of 2) PTHR11387:SF17 - CYTOCHROME C OXIDASE SUBUNIT 6B-LIKE-RELATED Genomic Order:  38
Name:  ? Araha.0550s0038 Secondary Identifier:  ? PAC:28843505
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Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Ahalleri PWY-3781 Arabidopsis halleri pathologic  
Ahalleri PWY-7279 Arabidopsis halleri pathologic  

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Araha.0550s0038 0.5kb upstream 0.5kb upstream 1891 true Scaffold550: 120000-121890 Arabidopsis halleri
Araha.0550s0038 0.5kb upstream 0.5kb upstream 500 false Scaffold550: 121391-121890 Arabidopsis halleri
Araha.0550s0038 0.5kb downstream 0.5kb downstream 1891 true Scaffold550: 119500-121390 Arabidopsis halleri
Araha.0550s0038 0.5kb downstream 0.5kb downstream 500 false Scaffold550: 119500-119999 Arabidopsis halleri
Araha.0550s0038 1.0kb upstream 1.0kb upstream 2391 true Scaffold550: 120000-122390 Arabidopsis halleri
Araha.0550s0038 1.0kb upstream 1.0kb upstream 1000 false Scaffold550: 121391-122390 Arabidopsis halleri
Araha.0550s0038 1.0kb downstream 1.0kb downstream 2391 true Scaffold550: 119000-121390 Arabidopsis halleri
Araha.0550s0038 1.0kb downstream 1.0kb downstream 1000 false Scaffold550: 119000-119999 Arabidopsis halleri
Araha.0550s0038 2.0kb upstream 2.0kb upstream 3391 true Scaffold550: 120000-123390 Arabidopsis halleri
Araha.0550s0038 2.0kb upstream 2.0kb upstream 2000 false Scaffold550: 121391-123390 Arabidopsis halleri
Araha.0550s0038 2.0kb downstream 2.0kb downstream 3391 true Scaffold550: 118000-121390 Arabidopsis halleri
Araha.0550s0038 2.0kb downstream 2.0kb downstream 2000 false Scaffold550: 118000-119999 Arabidopsis halleri
Araha.0550s0038 5.0kb upstream 5.0kb upstream 6391 true Scaffold550: 120000-126390 Arabidopsis halleri
Araha.0550s0038 5.0kb upstream 5.0kb upstream 5000 false Scaffold550: 121391-126390 Arabidopsis halleri
Araha.0550s0038 5.0kb downstream 5.0kb downstream 6391 true Scaffold550: 115000-121390 Arabidopsis halleri
Araha.0550s0038 5.0kb downstream 5.0kb downstream 5000 false Scaffold550: 115000-119999 Arabidopsis halleri
Araha.0550s0038 10.0kb upstream 10.0kb upstream 11391 true Scaffold550: 120000-131390 Arabidopsis halleri
Araha.0550s0038 10.0kb upstream 10.0kb upstream 10000 false Scaffold550: 121391-131390 Arabidopsis halleri
Araha.0550s0038 10.0kb downstream 10.0kb downstream 11391 true Scaffold550: 110000-121390 Arabidopsis halleri
Araha.0550s0038 10.0kb downstream 10.0kb downstream 10000 false Scaffold550: 110000-119999 Arabidopsis halleri

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122378831 5261 Brassicaceae View MSA
123836054 5264 Brassicales-Malvales View MSA
124340076 5266 SBM View MSA
124241119 5268 Malvidae View MSA
124068898 5270 Rosid View MSA
123741112 5271 Pentapetalae View MSA
122785907 5272 Eudicot View MSA
122042170 5273 Angiosperm View MSA
121351047 5274 Embryophyte View MSA
123424784 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain