Gene : Araha.0689s0004 A. halleri v1.1

Defline:  (1 of 2) PTHR12585:SF36 - SISTER CHROMATID COHESION 1 PROTEIN 3 Genomic Order:  4
Name:  ? Araha.0689s0004 Secondary Identifier:  ? PAC:28850999

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Araha.0689s0004 0.5kb upstream 0.5kb upstream 5426 true Scaffold689: 19052-24477 Arabidopsis halleri
Araha.0689s0004 0.5kb upstream 0.5kb upstream 500 false Scaffold689: 23978-24477 Arabidopsis halleri
Araha.0689s0004 0.5kb downstream 0.5kb downstream 5426 true Scaffold689: 18552-23977 Arabidopsis halleri
Araha.0689s0004 0.5kb downstream 0.5kb downstream 500 false Scaffold689: 18552-19051 Arabidopsis halleri
Araha.0689s0004 1.0kb upstream 1.0kb upstream 5926 true Scaffold689: 19052-24977 Arabidopsis halleri
Araha.0689s0004 1.0kb upstream 1.0kb upstream 1000 false Scaffold689: 23978-24977 Arabidopsis halleri
Araha.0689s0004 1.0kb downstream 1.0kb downstream 5926 true Scaffold689: 18052-23977 Arabidopsis halleri
Araha.0689s0004 1.0kb downstream 1.0kb downstream 1000 false Scaffold689: 18052-19051 Arabidopsis halleri
Araha.0689s0004 2.0kb upstream 2.0kb upstream 6926 true Scaffold689: 19052-25977 Arabidopsis halleri
Araha.0689s0004 2.0kb upstream 2.0kb upstream 2000 false Scaffold689: 23978-25977 Arabidopsis halleri
Araha.0689s0004 2.0kb downstream 2.0kb downstream 6926 true Scaffold689: 17052-23977 Arabidopsis halleri
Araha.0689s0004 2.0kb downstream 2.0kb downstream 2000 false Scaffold689: 17052-19051 Arabidopsis halleri
Araha.0689s0004 5.0kb upstream 5.0kb upstream 9926 true Scaffold689: 19052-28977 Arabidopsis halleri
Araha.0689s0004 5.0kb upstream 5.0kb upstream 5000 false Scaffold689: 23978-28977 Arabidopsis halleri
Araha.0689s0004 5.0kb downstream 5.0kb downstream 9926 true Scaffold689: 14052-23977 Arabidopsis halleri
Araha.0689s0004 5.0kb downstream 5.0kb downstream 5000 false Scaffold689: 14052-19051 Arabidopsis halleri
Araha.0689s0004 10.0kb upstream 10.0kb upstream 14926 true Scaffold689: 19052-33977 Arabidopsis halleri
Araha.0689s0004 10.0kb upstream 10.0kb upstream 10000 false Scaffold689: 23978-33977 Arabidopsis halleri
Araha.0689s0004 10.0kb downstream 10.0kb downstream 14926 true Scaffold689: 9052-23977 Arabidopsis halleri
Araha.0689s0004 10.0kb downstream 10.0kb downstream 10000 false Scaffold689: 9052-19051 Arabidopsis halleri

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122374014 5261 Brassicaceae View MSA
123831054 5264 Brassicales-Malvales View MSA
124340963 5266 SBM View MSA
124237378 5268 Malvidae View MSA
124066779 5270 Rosid View MSA
123738788 5271 Pentapetalae View MSA
122789248 5272 Eudicot View MSA
122048297 5273 Angiosperm View MSA
121349590 5274 Embryophyte View MSA
123426470 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain