Gene : Araha.0732s0002 A. halleri v1.1
Defline:  (1 of 1) PTHR21000:SF5 - DIHYDROXY-ACID DEHYDRATASE, MITOCHONDRIAL Genomic Order:  2
Name:  ? Araha.0732s0002 Secondary Identifier:  ? PAC:28844879
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Sequence Feature Displayer

Ontology Annotation Displayer

4 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Ahalleri BRANCHED-CHAIN-AA-SYN-PWY Arabidopsis halleri pathologic  
Ahalleri ILEUSYN-PWY Arabidopsis halleri pathologic  
Ahalleri PWY-3001 Arabidopsis halleri pathologic  
Ahalleri VALSYN-PWY Arabidopsis halleri pathologic  

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Araha.0732s0002 0.5kb upstream 0.5kb upstream 4139 true Scaffold732: 5652-9790 Arabidopsis halleri
Araha.0732s0002 0.5kb upstream 0.5kb upstream 500 false Scaffold732: 9291-9790 Arabidopsis halleri
Araha.0732s0002 0.5kb downstream 0.5kb downstream 4139 true Scaffold732: 5152-9290 Arabidopsis halleri
Araha.0732s0002 0.5kb downstream 0.5kb downstream 500 false Scaffold732: 5152-5651 Arabidopsis halleri
Araha.0732s0002 1.0kb upstream 1.0kb upstream 4639 true Scaffold732: 5652-10290 Arabidopsis halleri
Araha.0732s0002 1.0kb upstream 1.0kb upstream 1000 false Scaffold732: 9291-10290 Arabidopsis halleri
Araha.0732s0002 1.0kb downstream 1.0kb downstream 4639 true Scaffold732: 4652-9290 Arabidopsis halleri
Araha.0732s0002 1.0kb downstream 1.0kb downstream 1000 false Scaffold732: 4652-5651 Arabidopsis halleri
Araha.0732s0002 2.0kb upstream 2.0kb upstream 5639 true Scaffold732: 5652-11290 Arabidopsis halleri
Araha.0732s0002 2.0kb upstream 2.0kb upstream 2000 false Scaffold732: 9291-11290 Arabidopsis halleri
Araha.0732s0002 2.0kb downstream 2.0kb downstream 5639 true Scaffold732: 3652-9290 Arabidopsis halleri
Araha.0732s0002 2.0kb downstream 2.0kb downstream 2000 false Scaffold732: 3652-5651 Arabidopsis halleri
Araha.0732s0002 5.0kb upstream 5.0kb upstream 8639 true Scaffold732: 5652-14290 Arabidopsis halleri
Araha.0732s0002 5.0kb upstream 5.0kb upstream 5000 false Scaffold732: 9291-14290 Arabidopsis halleri
Araha.0732s0002 5.0kb downstream 5.0kb downstream 8639 true Scaffold732: 652-9290 Arabidopsis halleri
Araha.0732s0002 5.0kb downstream 5.0kb downstream 5000 false Scaffold732: 652-5651 Arabidopsis halleri
Araha.0732s0002 10.0kb upstream 10.0kb upstream 13639 true Scaffold732: 5652-19290 Arabidopsis halleri
Araha.0732s0002 10.0kb upstream 10.0kb upstream 10000 false Scaffold732: 9291-19290 Arabidopsis halleri
Araha.0732s0002 10.0kb downstream 10.0kb downstream 9290 true Scaffold732: 1-9290 Arabidopsis halleri
Araha.0732s0002 10.0kb downstream 10.0kb downstream 5651 false Scaffold732: 1-5651 Arabidopsis halleri

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122373960 5261 Brassicaceae View MSA
123828725 5264 Brassicales-Malvales View MSA
124341291 5266 SBM View MSA
124241984 5268 Malvidae View MSA
124066376 5270 Rosid View MSA
123742145 5271 Pentapetalae View MSA
122787783 5272 Eudicot View MSA
122041651 5273 Angiosperm View MSA
121345047 5274 Embryophyte View MSA
123424997 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain