Gene : Araha.0650s0004 A. halleri v1.1

Defline:  (1 of 3) PTHR12290:SF18 - PROTEIN CORNICHON HOMOLOG 3-RELATED Genomic Order:  4
Name:  ? Araha.0650s0004 Secondary Identifier:  ? PAC:28863642

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Araha.0650s0004 0.5kb upstream 0.5kb upstream 2106 true Scaffold650: 7208-9313 Arabidopsis halleri
Araha.0650s0004 0.5kb upstream 0.5kb upstream 500 false Scaffold650: 8814-9313 Arabidopsis halleri
Araha.0650s0004 0.5kb downstream 0.5kb downstream 2106 true Scaffold650: 6708-8813 Arabidopsis halleri
Araha.0650s0004 0.5kb downstream 0.5kb downstream 500 false Scaffold650: 6708-7207 Arabidopsis halleri
Araha.0650s0004 1.0kb upstream 1.0kb upstream 2606 true Scaffold650: 7208-9813 Arabidopsis halleri
Araha.0650s0004 1.0kb upstream 1.0kb upstream 1000 false Scaffold650: 8814-9813 Arabidopsis halleri
Araha.0650s0004 1.0kb downstream 1.0kb downstream 2606 true Scaffold650: 6208-8813 Arabidopsis halleri
Araha.0650s0004 1.0kb downstream 1.0kb downstream 1000 false Scaffold650: 6208-7207 Arabidopsis halleri
Araha.0650s0004 2.0kb upstream 2.0kb upstream 3606 true Scaffold650: 7208-10813 Arabidopsis halleri
Araha.0650s0004 2.0kb upstream 2.0kb upstream 2000 false Scaffold650: 8814-10813 Arabidopsis halleri
Araha.0650s0004 2.0kb downstream 2.0kb downstream 3606 true Scaffold650: 5208-8813 Arabidopsis halleri
Araha.0650s0004 2.0kb downstream 2.0kb downstream 2000 false Scaffold650: 5208-7207 Arabidopsis halleri
Araha.0650s0004 5.0kb upstream 5.0kb upstream 6606 true Scaffold650: 7208-13813 Arabidopsis halleri
Araha.0650s0004 5.0kb upstream 5.0kb upstream 5000 false Scaffold650: 8814-13813 Arabidopsis halleri
Araha.0650s0004 5.0kb downstream 5.0kb downstream 6606 true Scaffold650: 2208-8813 Arabidopsis halleri
Araha.0650s0004 5.0kb downstream 5.0kb downstream 5000 false Scaffold650: 2208-7207 Arabidopsis halleri
Araha.0650s0004 10.0kb upstream 10.0kb upstream 11606 true Scaffold650: 7208-18813 Arabidopsis halleri
Araha.0650s0004 10.0kb upstream 10.0kb upstream 10000 false Scaffold650: 8814-18813 Arabidopsis halleri
Araha.0650s0004 10.0kb downstream 10.0kb downstream 8813 true Scaffold650: 1-8813 Arabidopsis halleri
Araha.0650s0004 10.0kb downstream 10.0kb downstream 7207 false Scaffold650: 1-7207 Arabidopsis halleri

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122381235 5261 Brassicaceae View MSA
123835843 5264 Brassicales-Malvales View MSA
124341582 5266 SBM View MSA
124248925 5268 Malvidae View MSA
124061423 5270 Rosid View MSA
123752732 5271 Pentapetalae View MSA
122796851 5272 Eudicot View MSA
122045878 5273 Angiosperm View MSA
121348735 5274 Embryophyte View MSA
123427918 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain