Gene : Araha.0858s0008 A. halleri v1.1
Defline:  (1 of 2) PTHR23076:SF33 - ATP-DEPENDENT ZINC METALLOPROTEASE FTSH 1, CHLOROPLASTIC-RELATED Genomic Order:  8
Name:  ? Araha.0858s0008 Secondary Identifier:  ? PAC:28849639
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Araha.0858s0008 0.5kb upstream 0.5kb upstream 3323 true Scaffold858: 39678-43000 Arabidopsis halleri
Araha.0858s0008 0.5kb upstream 0.5kb upstream 500 false Scaffold858: 39678-40177 Arabidopsis halleri
Araha.0858s0008 0.5kb downstream 0.5kb downstream 3323 true Scaffold858: 40178-43500 Arabidopsis halleri
Araha.0858s0008 0.5kb downstream 0.5kb downstream 500 false Scaffold858: 43001-43500 Arabidopsis halleri
Araha.0858s0008 1.0kb upstream 1.0kb upstream 3823 true Scaffold858: 39178-43000 Arabidopsis halleri
Araha.0858s0008 1.0kb upstream 1.0kb upstream 1000 false Scaffold858: 39178-40177 Arabidopsis halleri
Araha.0858s0008 1.0kb downstream 1.0kb downstream 3823 true Scaffold858: 40178-44000 Arabidopsis halleri
Araha.0858s0008 1.0kb downstream 1.0kb downstream 1000 false Scaffold858: 43001-44000 Arabidopsis halleri
Araha.0858s0008 2.0kb upstream 2.0kb upstream 4823 true Scaffold858: 38178-43000 Arabidopsis halleri
Araha.0858s0008 2.0kb upstream 2.0kb upstream 2000 false Scaffold858: 38178-40177 Arabidopsis halleri
Araha.0858s0008 2.0kb downstream 2.0kb downstream 4823 true Scaffold858: 40178-45000 Arabidopsis halleri
Araha.0858s0008 2.0kb downstream 2.0kb downstream 2000 false Scaffold858: 43001-45000 Arabidopsis halleri
Araha.0858s0008 5.0kb upstream 5.0kb upstream 7823 true Scaffold858: 35178-43000 Arabidopsis halleri
Araha.0858s0008 5.0kb upstream 5.0kb upstream 5000 false Scaffold858: 35178-40177 Arabidopsis halleri
Araha.0858s0008 5.0kb downstream 5.0kb downstream 7823 true Scaffold858: 40178-48000 Arabidopsis halleri
Araha.0858s0008 5.0kb downstream 5.0kb downstream 5000 false Scaffold858: 43001-48000 Arabidopsis halleri
Araha.0858s0008 10.0kb upstream 10.0kb upstream 12823 true Scaffold858: 30178-43000 Arabidopsis halleri
Araha.0858s0008 10.0kb upstream 10.0kb upstream 10000 false Scaffold858: 30178-40177 Arabidopsis halleri
Araha.0858s0008 10.0kb downstream 10.0kb downstream 11403 true Scaffold858: 40178-51580 Arabidopsis halleri
Araha.0858s0008 10.0kb downstream 10.0kb downstream 8580 false Scaffold858: 43001-51580 Arabidopsis halleri

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122360689 5261 Brassicaceae View MSA
123838553 5264 Brassicales-Malvales View MSA
124337875 5266 SBM View MSA
124238414 5268 Malvidae View MSA
124060614 5270 Rosid View MSA
123737451 5271 Pentapetalae View MSA
122792150 5272 Eudicot View MSA
122046642 5273 Angiosperm View MSA
121346512 5274 Embryophyte View MSA
123425128 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain