Gene : Araha.0858s0003 A. halleri v1.1

Defline:  (1 of 29) PF03000 - NPH3 family (NPH3) Genomic Order:  3
Name:  ? Araha.0858s0003 Secondary Identifier:  ? PAC:28849643

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Araha.0858s0003 0.5kb upstream 0.5kb upstream 3005 true Scaffold858: 9485-12489 Arabidopsis halleri
Araha.0858s0003 0.5kb upstream 0.5kb upstream 500 false Scaffold858: 9485-9984 Arabidopsis halleri
Araha.0858s0003 0.5kb downstream 0.5kb downstream 3005 true Scaffold858: 9985-12989 Arabidopsis halleri
Araha.0858s0003 0.5kb downstream 0.5kb downstream 500 false Scaffold858: 12490-12989 Arabidopsis halleri
Araha.0858s0003 1.0kb upstream 1.0kb upstream 3505 true Scaffold858: 8985-12489 Arabidopsis halleri
Araha.0858s0003 1.0kb upstream 1.0kb upstream 1000 false Scaffold858: 8985-9984 Arabidopsis halleri
Araha.0858s0003 1.0kb downstream 1.0kb downstream 3505 true Scaffold858: 9985-13489 Arabidopsis halleri
Araha.0858s0003 1.0kb downstream 1.0kb downstream 1000 false Scaffold858: 12490-13489 Arabidopsis halleri
Araha.0858s0003 2.0kb upstream 2.0kb upstream 4505 true Scaffold858: 7985-12489 Arabidopsis halleri
Araha.0858s0003 2.0kb upstream 2.0kb upstream 2000 false Scaffold858: 7985-9984 Arabidopsis halleri
Araha.0858s0003 2.0kb downstream 2.0kb downstream 4505 true Scaffold858: 9985-14489 Arabidopsis halleri
Araha.0858s0003 2.0kb downstream 2.0kb downstream 2000 false Scaffold858: 12490-14489 Arabidopsis halleri
Araha.0858s0003 5.0kb upstream 5.0kb upstream 7505 true Scaffold858: 4985-12489 Arabidopsis halleri
Araha.0858s0003 5.0kb upstream 5.0kb upstream 5000 false Scaffold858: 4985-9984 Arabidopsis halleri
Araha.0858s0003 5.0kb downstream 5.0kb downstream 7505 true Scaffold858: 9985-17489 Arabidopsis halleri
Araha.0858s0003 5.0kb downstream 5.0kb downstream 5000 false Scaffold858: 12490-17489 Arabidopsis halleri
Araha.0858s0003 10.0kb upstream 10.0kb upstream 12489 true Scaffold858: 1-12489 Arabidopsis halleri
Araha.0858s0003 10.0kb upstream 10.0kb upstream 9984 false Scaffold858: 1-9984 Arabidopsis halleri
Araha.0858s0003 10.0kb downstream 10.0kb downstream 12505 true Scaffold858: 9985-22489 Arabidopsis halleri
Araha.0858s0003 10.0kb downstream 10.0kb downstream 10000 false Scaffold858: 12490-22489 Arabidopsis halleri

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122369848 5261 Brassicaceae View MSA
123799855 5264 Brassicales-Malvales View MSA
124297336 5266 SBM View MSA
124247811 5268 Malvidae View MSA
124071216 5270 Rosid View MSA
123750783 5271 Pentapetalae View MSA
122794459 5272 Eudicot View MSA
122048386 5273 Angiosperm View MSA
121349864 5274 Embryophyte View MSA
123381475 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain