Gene : Araha.0887s0012 A. halleri v1.1

Defline:  (1 of 2) PTHR26402:SF507 - TWO-COMPONENT RESPONSE REGULATOR ARR8-RELATED Genomic Order:  12
Name:  ? Araha.0887s0012 Secondary Identifier:  ? PAC:28841635

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

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Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Araha.0887s0012 0.5kb upstream 0.5kb upstream 2587 true Scaffold887: 43663-46249 Arabidopsis halleri
Araha.0887s0012 0.5kb upstream 0.5kb upstream 500 false Scaffold887: 43663-44162 Arabidopsis halleri
Araha.0887s0012 0.5kb downstream 0.5kb downstream 2587 true Scaffold887: 44163-46749 Arabidopsis halleri
Araha.0887s0012 0.5kb downstream 0.5kb downstream 500 false Scaffold887: 46250-46749 Arabidopsis halleri
Araha.0887s0012 1.0kb upstream 1.0kb upstream 3087 true Scaffold887: 43163-46249 Arabidopsis halleri
Araha.0887s0012 1.0kb upstream 1.0kb upstream 1000 false Scaffold887: 43163-44162 Arabidopsis halleri
Araha.0887s0012 1.0kb downstream 1.0kb downstream 3087 true Scaffold887: 44163-47249 Arabidopsis halleri
Araha.0887s0012 1.0kb downstream 1.0kb downstream 1000 false Scaffold887: 46250-47249 Arabidopsis halleri
Araha.0887s0012 2.0kb upstream 2.0kb upstream 4087 true Scaffold887: 42163-46249 Arabidopsis halleri
Araha.0887s0012 2.0kb upstream 2.0kb upstream 2000 false Scaffold887: 42163-44162 Arabidopsis halleri
Araha.0887s0012 2.0kb downstream 2.0kb downstream 4087 true Scaffold887: 44163-48249 Arabidopsis halleri
Araha.0887s0012 2.0kb downstream 2.0kb downstream 2000 false Scaffold887: 46250-48249 Arabidopsis halleri
Araha.0887s0012 5.0kb upstream 5.0kb upstream 7087 true Scaffold887: 39163-46249 Arabidopsis halleri
Araha.0887s0012 5.0kb upstream 5.0kb upstream 5000 false Scaffold887: 39163-44162 Arabidopsis halleri
Araha.0887s0012 5.0kb downstream 5.0kb downstream 7087 true Scaffold887: 44163-51249 Arabidopsis halleri
Araha.0887s0012 5.0kb downstream 5.0kb downstream 5000 false Scaffold887: 46250-51249 Arabidopsis halleri
Araha.0887s0012 10.0kb upstream 10.0kb upstream 12087 true Scaffold887: 34163-46249 Arabidopsis halleri
Araha.0887s0012 10.0kb upstream 10.0kb upstream 10000 false Scaffold887: 34163-44162 Arabidopsis halleri
Araha.0887s0012 10.0kb downstream 10.0kb downstream 11239 true Scaffold887: 44163-55401 Arabidopsis halleri
Araha.0887s0012 10.0kb downstream 10.0kb downstream 9152 false Scaffold887: 46250-55401 Arabidopsis halleri

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122366825 5261 Brassicaceae View MSA
123839466 5264 Brassicales-Malvales View MSA
124348646 5266 SBM View MSA
124253641 5268 Malvidae View MSA
124073776 5270 Rosid View MSA
123749926 5271 Pentapetalae View MSA
122796134 5272 Eudicot View MSA
122050729 5273 Angiosperm View MSA
123428935 5275 Viridiplantae View MSA
121349796 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain