Gene : Araha.1159s0005 A. halleri v1.1

Defline:  (1 of 2) PTHR22880:SF134 - TRANSCRIPTION FACTOR GTE8-RELATED Genomic Order:  5
Name:  ? Araha.1159s0005 Secondary Identifier:  ? PAC:28850465

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Araha.1159s0005 0.5kb upstream 0.5kb upstream 4809 true Scaffold1159: 25419-30227 Arabidopsis halleri
Araha.1159s0005 0.5kb upstream 0.5kb upstream 500 false Scaffold1159: 25419-25918 Arabidopsis halleri
Araha.1159s0005 0.5kb downstream 0.5kb downstream 4809 true Scaffold1159: 25919-30727 Arabidopsis halleri
Araha.1159s0005 0.5kb downstream 0.5kb downstream 500 false Scaffold1159: 30228-30727 Arabidopsis halleri
Araha.1159s0005 1.0kb upstream 1.0kb upstream 5309 true Scaffold1159: 24919-30227 Arabidopsis halleri
Araha.1159s0005 1.0kb upstream 1.0kb upstream 1000 false Scaffold1159: 24919-25918 Arabidopsis halleri
Araha.1159s0005 1.0kb downstream 1.0kb downstream 5309 true Scaffold1159: 25919-31227 Arabidopsis halleri
Araha.1159s0005 1.0kb downstream 1.0kb downstream 1000 false Scaffold1159: 30228-31227 Arabidopsis halleri
Araha.1159s0005 2.0kb upstream 2.0kb upstream 6309 true Scaffold1159: 23919-30227 Arabidopsis halleri
Araha.1159s0005 2.0kb upstream 2.0kb upstream 2000 false Scaffold1159: 23919-25918 Arabidopsis halleri
Araha.1159s0005 2.0kb downstream 2.0kb downstream 6309 true Scaffold1159: 25919-32227 Arabidopsis halleri
Araha.1159s0005 2.0kb downstream 2.0kb downstream 2000 false Scaffold1159: 30228-32227 Arabidopsis halleri
Araha.1159s0005 5.0kb upstream 5.0kb upstream 9309 true Scaffold1159: 20919-30227 Arabidopsis halleri
Araha.1159s0005 5.0kb upstream 5.0kb upstream 5000 false Scaffold1159: 20919-25918 Arabidopsis halleri
Araha.1159s0005 5.0kb downstream 5.0kb downstream 9309 true Scaffold1159: 25919-35227 Arabidopsis halleri
Araha.1159s0005 5.0kb downstream 5.0kb downstream 5000 false Scaffold1159: 30228-35227 Arabidopsis halleri
Araha.1159s0005 10.0kb upstream 10.0kb upstream 14309 true Scaffold1159: 15919-30227 Arabidopsis halleri
Araha.1159s0005 10.0kb upstream 10.0kb upstream 10000 false Scaffold1159: 15919-25918 Arabidopsis halleri
Araha.1159s0005 10.0kb downstream 10.0kb downstream 14309 true Scaffold1159: 25919-40227 Arabidopsis halleri
Araha.1159s0005 10.0kb downstream 10.0kb downstream 10000 false Scaffold1159: 30228-40227 Arabidopsis halleri

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122379450 5261 Brassicaceae View MSA
123802274 5264 Brassicales-Malvales View MSA
124299483 5266 SBM View MSA
124150885 5268 Malvidae View MSA
123876423 5270 Rosid View MSA
123742171 5271 Pentapetalae View MSA
122795525 5272 Eudicot View MSA
122044532 5273 Angiosperm View MSA
123429103 5275 Viridiplantae View MSA
121347470 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain