Gene : Araha.1197s0008 A. halleri v1.1

Defline:  (1 of 6) PF13259 - Protein of unknown function (DUF4050) (DUF4050) Genomic Order:  8
Name:  ? Araha.1197s0008 Secondary Identifier:  ? PAC:28852436

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Araha.1197s0008 0.5kb upstream 0.5kb upstream 3063 true Scaffold1197: 49151-52213 Arabidopsis halleri
Araha.1197s0008 0.5kb upstream 0.5kb upstream 500 false Scaffold1197: 51714-52213 Arabidopsis halleri
Araha.1197s0008 0.5kb downstream 0.5kb downstream 3063 true Scaffold1197: 48651-51713 Arabidopsis halleri
Araha.1197s0008 0.5kb downstream 0.5kb downstream 500 false Scaffold1197: 48651-49150 Arabidopsis halleri
Araha.1197s0008 1.0kb upstream 1.0kb upstream 3563 true Scaffold1197: 49151-52713 Arabidopsis halleri
Araha.1197s0008 1.0kb upstream 1.0kb upstream 1000 false Scaffold1197: 51714-52713 Arabidopsis halleri
Araha.1197s0008 1.0kb downstream 1.0kb downstream 3563 true Scaffold1197: 48151-51713 Arabidopsis halleri
Araha.1197s0008 1.0kb downstream 1.0kb downstream 1000 false Scaffold1197: 48151-49150 Arabidopsis halleri
Araha.1197s0008 2.0kb upstream 2.0kb upstream 4563 true Scaffold1197: 49151-53713 Arabidopsis halleri
Araha.1197s0008 2.0kb upstream 2.0kb upstream 2000 false Scaffold1197: 51714-53713 Arabidopsis halleri
Araha.1197s0008 2.0kb downstream 2.0kb downstream 4563 true Scaffold1197: 47151-51713 Arabidopsis halleri
Araha.1197s0008 2.0kb downstream 2.0kb downstream 2000 false Scaffold1197: 47151-49150 Arabidopsis halleri
Araha.1197s0008 5.0kb upstream 5.0kb upstream 7563 true Scaffold1197: 49151-56713 Arabidopsis halleri
Araha.1197s0008 5.0kb upstream 5.0kb upstream 5000 false Scaffold1197: 51714-56713 Arabidopsis halleri
Araha.1197s0008 5.0kb downstream 5.0kb downstream 7563 true Scaffold1197: 44151-51713 Arabidopsis halleri
Araha.1197s0008 5.0kb downstream 5.0kb downstream 5000 false Scaffold1197: 44151-49150 Arabidopsis halleri
Araha.1197s0008 10.0kb upstream 10.0kb upstream 12563 true Scaffold1197: 49151-61713 Arabidopsis halleri
Araha.1197s0008 10.0kb upstream 10.0kb upstream 10000 false Scaffold1197: 51714-61713 Arabidopsis halleri
Araha.1197s0008 10.0kb downstream 10.0kb downstream 12563 true Scaffold1197: 39151-51713 Arabidopsis halleri
Araha.1197s0008 10.0kb downstream 10.0kb downstream 10000 false Scaffold1197: 39151-49150 Arabidopsis halleri

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122368546 5261 Brassicaceae View MSA
123835231 5264 Brassicales-Malvales View MSA
124351095 5266 SBM View MSA
124254047 5268 Malvidae View MSA
124070890 5270 Rosid View MSA
123742803 5271 Pentapetalae View MSA
122796350 5272 Eudicot View MSA
122042396 5273 Angiosperm View MSA
121349400 5274 Embryophyte View MSA
123427795 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain