Gene : Araha.1135s0012 A. halleri v1.1

Defline:  (1 of 2) PTHR10666//PTHR10666:SF159 - UBIQUITIN Genomic Order:  12
Name:  ? Araha.1135s0012 Secondary Identifier:  ? PAC:28860240

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Araha.1135s0012 0.5kb upstream 0.5kb upstream 1072 true Scaffold1135: 46175-47246 Arabidopsis halleri
Araha.1135s0012 0.5kb upstream 0.5kb upstream 500 false Scaffold1135: 46175-46674 Arabidopsis halleri
Araha.1135s0012 0.5kb downstream 0.5kb downstream 1072 true Scaffold1135: 46675-47746 Arabidopsis halleri
Araha.1135s0012 0.5kb downstream 0.5kb downstream 500 false Scaffold1135: 47247-47746 Arabidopsis halleri
Araha.1135s0012 1.0kb upstream 1.0kb upstream 1572 true Scaffold1135: 45675-47246 Arabidopsis halleri
Araha.1135s0012 1.0kb upstream 1.0kb upstream 1000 false Scaffold1135: 45675-46674 Arabidopsis halleri
Araha.1135s0012 1.0kb downstream 1.0kb downstream 1572 true Scaffold1135: 46675-48246 Arabidopsis halleri
Araha.1135s0012 1.0kb downstream 1.0kb downstream 1000 false Scaffold1135: 47247-48246 Arabidopsis halleri
Araha.1135s0012 2.0kb upstream 2.0kb upstream 2572 true Scaffold1135: 44675-47246 Arabidopsis halleri
Araha.1135s0012 2.0kb upstream 2.0kb upstream 2000 false Scaffold1135: 44675-46674 Arabidopsis halleri
Araha.1135s0012 2.0kb downstream 2.0kb downstream 2572 true Scaffold1135: 46675-49246 Arabidopsis halleri
Araha.1135s0012 2.0kb downstream 2.0kb downstream 2000 false Scaffold1135: 47247-49246 Arabidopsis halleri
Araha.1135s0012 5.0kb upstream 5.0kb upstream 5572 true Scaffold1135: 41675-47246 Arabidopsis halleri
Araha.1135s0012 5.0kb upstream 5.0kb upstream 5000 false Scaffold1135: 41675-46674 Arabidopsis halleri
Araha.1135s0012 5.0kb downstream 5.0kb downstream 3977 true Scaffold1135: 46675-50651 Arabidopsis halleri
Araha.1135s0012 5.0kb downstream 5.0kb downstream 3405 false Scaffold1135: 47247-50651 Arabidopsis halleri
Araha.1135s0012 10.0kb upstream 10.0kb upstream 10572 true Scaffold1135: 36675-47246 Arabidopsis halleri
Araha.1135s0012 10.0kb upstream 10.0kb upstream 10000 false Scaffold1135: 36675-46674 Arabidopsis halleri
Araha.1135s0012 10.0kb downstream 10.0kb downstream 3977 true Scaffold1135: 46675-50651 Arabidopsis halleri
Araha.1135s0012 10.0kb downstream 10.0kb downstream 3405 false Scaffold1135: 47247-50651 Arabidopsis halleri

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121487822 5273 Angiosperm Singleton cluster - no MSA
122321554 5261 Brassicaceae Singleton cluster - no MSA
123763149 5264 Brassicales-Malvales Singleton cluster - no MSA
124261784 5266 SBM Singleton cluster - no MSA
124118403 5268 Malvidae Singleton cluster - no MSA
123847793 5270 Rosid Singleton cluster - no MSA
123434073 5271 Pentapetalae Singleton cluster - no MSA
122469693 5272 Eudicot Singleton cluster - no MSA
120761211 5274 Embryophyte Singleton cluster - no MSA
122803654 5275 Viridiplantae Singleton cluster - no MSA

0 Rna Seq Expressions

0 Strain