Gene : Araha.1089s0003 A. halleri v1.1

Defline:  (1 of 2) PTHR32002:SF6 - PROTEIN NLP4-RELATED Genomic Order:  3
Name:  ? Araha.1089s0003 Secondary Identifier:  ? PAC:28851768

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Araha.1089s0003 0.5kb upstream 0.5kb upstream 4349 true Scaffold1089: 14270-18618 Arabidopsis halleri
Araha.1089s0003 0.5kb upstream 0.5kb upstream 500 false Scaffold1089: 14270-14769 Arabidopsis halleri
Araha.1089s0003 0.5kb downstream 0.5kb downstream 4349 true Scaffold1089: 14770-19118 Arabidopsis halleri
Araha.1089s0003 0.5kb downstream 0.5kb downstream 500 false Scaffold1089: 18619-19118 Arabidopsis halleri
Araha.1089s0003 1.0kb upstream 1.0kb upstream 4849 true Scaffold1089: 13770-18618 Arabidopsis halleri
Araha.1089s0003 1.0kb upstream 1.0kb upstream 1000 false Scaffold1089: 13770-14769 Arabidopsis halleri
Araha.1089s0003 1.0kb downstream 1.0kb downstream 4849 true Scaffold1089: 14770-19618 Arabidopsis halleri
Araha.1089s0003 1.0kb downstream 1.0kb downstream 1000 false Scaffold1089: 18619-19618 Arabidopsis halleri
Araha.1089s0003 2.0kb upstream 2.0kb upstream 5849 true Scaffold1089: 12770-18618 Arabidopsis halleri
Araha.1089s0003 2.0kb upstream 2.0kb upstream 2000 false Scaffold1089: 12770-14769 Arabidopsis halleri
Araha.1089s0003 2.0kb downstream 2.0kb downstream 5849 true Scaffold1089: 14770-20618 Arabidopsis halleri
Araha.1089s0003 2.0kb downstream 2.0kb downstream 2000 false Scaffold1089: 18619-20618 Arabidopsis halleri
Araha.1089s0003 5.0kb upstream 5.0kb upstream 8849 true Scaffold1089: 9770-18618 Arabidopsis halleri
Araha.1089s0003 5.0kb upstream 5.0kb upstream 5000 false Scaffold1089: 9770-14769 Arabidopsis halleri
Araha.1089s0003 5.0kb downstream 5.0kb downstream 8849 true Scaffold1089: 14770-23618 Arabidopsis halleri
Araha.1089s0003 5.0kb downstream 5.0kb downstream 5000 false Scaffold1089: 18619-23618 Arabidopsis halleri
Araha.1089s0003 10.0kb upstream 10.0kb upstream 13849 true Scaffold1089: 4770-18618 Arabidopsis halleri
Araha.1089s0003 10.0kb upstream 10.0kb upstream 10000 false Scaffold1089: 4770-14769 Arabidopsis halleri
Araha.1089s0003 10.0kb downstream 10.0kb downstream 13849 true Scaffold1089: 14770-28618 Arabidopsis halleri
Araha.1089s0003 10.0kb downstream 10.0kb downstream 10000 false Scaffold1089: 18619-28618 Arabidopsis halleri

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122367273 5261 Brassicaceae View MSA
123831594 5264 Brassicales-Malvales View MSA
124340100 5266 SBM View MSA
124251360 5268 Malvidae View MSA
124068649 5270 Rosid View MSA
123748855 5271 Pentapetalae View MSA
122793045 5272 Eudicot View MSA
122051349 5273 Angiosperm View MSA
121350940 5274 Embryophyte View MSA
123428170 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain